OK I did not want to go to much into details... So I want to use whose variables to write to the new text file e.g. out_PyMOL_angles_{$pdbid}.txt (which will be actually a PyMOL script to calculate structural properties in the protein e.g. angle between two helices) such as:
But with the above part I am fine.
I just need to set/assign all the values from the original .txt file into unique variables:
Dear all,
I am novice in C+= programing. I would like to seek help in one of the progra. Here it is, I have txt file which has the data as following order
varA varB
-21 0
-21.2 3, 4, 5, 6
-21.4 45, 65, 87, 98, 98
-22.0 345677, 349887, 98766, 877654, 987543
-23.0 76549,... (17 Replies)
I'm having trouble with a simple piece of code.
IFS=,
echo "1,2,3,4,5,6,7,8" | while read x y
do
echo "x=$x"
echo "y=$y"
done
I'm hoping for
x=1
y=2
x=3
y=4
.
.
.
but I'm getting
x=1 (3 Replies)
I have a file of lines with the following format:
AACCCGTAGATCCGAACTTGTG ACCCGTAGATCCGAACTTGTG CCGTAGATCCGAACTTGTG CGTAGATCCGAACTTGT I want to give a header to each line, using awk, where the header is equal to the line that follows, like this:
>AACCCGTAGATCCGAACTTGTG ... (2 Replies)
Hey everyone,
I have a bunch of lines with values in field 4 that I am interested in.
If these values are between 1 and 3 I want it to count all these values to all be counted together and then have the computer print out
LOW and the number of lines with those values in between 1 and 3,... (2 Replies)
I have a file containing multiple values, some of them are pipe separated which are to be read as separate values and some of them are single value all are these need to store in variables.
I need to read this file which is an input to my script
Config.txt
file name, first path, second... (7 Replies)
Looking for a little help here.
I have 1000's of text files within a multiple folders.
YYYY/
/MM
/1000's Files
Eg.
2014/01/1000 files
2014/02/1237 files
2014/03/1400 files
There are folders for each year and each month, and within each monthly folder there are... (4 Replies)
Hi,
I managed to read and print variable as shown in the below code.
table_name=table1,table2,table3
i=0
IFS=","
for i in $table_name
do
echo $i
done
Is there a way how I can read more than one variable. For example I need to read 2 variables and populate the output... (6 Replies)
Hello Gurus,
I have a multiple pipe separated files which have records going over multiple Lines. End of line separator is \n and records going over multiple lines have <CR> as separator. below is example from one file.
1|ABC DEF|100|10
2|PQ
RS
T|200|20
3| UVWXYZ|300|30
4| GHIJKL|400|40... (7 Replies)
I have requirement to split below file (sample.csv) into multiple files by using the unique columns (first 3 are unique columns)
sample.csv
123|22|56789|ABCDEF|12AB34|2019-07-10|2019-07-10|443.3400|1|1
123|12|5679|BCDEFG|34CD56|2019-07-10|2019-07-10|896.7200|1|2... (3 Replies)
Discussion started by: RVSP
3 Replies
LEARN ABOUT OPENSOLARIS
gvfs-cat
gvfs-cat(1) User Commands gvfs-cat(1)NAME
gvfs-cat - print a file to standard output using the VFS system
SYNOPSIS
gvfs-cat URI
DESCRIPTION
gvfs-cat prints a file to standard output using the virtual file system to access the file via a URI.
OPERANDS
The following operands are supported:
URI Specifies the file location in standard URI format.
EXAMPLES
Example 1: Cat a File From a Web Server
example% gvfs-cat http://www.sun.com
Example 2: Cat a Local File
example% gvfs-cat file:///home/user/README.txt
ENVIRONMENT VARIABLES
See environ(5) for descriptions of the following environment variables: NLSPATH.
EXIT STATUS
The exit value 0 is returned regardless of success or failure.
FILES
The following files are used by this application:
/usr/bin/gvfs-cat Executable to print a file to standard output using the VFS system
ATTRIBUTES
See attributes(5) for descriptions of the following attributes:
+-----------------------------+-----------------------------+
| ATTRIBUTE TYPE | ATTRIBUTE VALUE |
+-----------------------------+-----------------------------+
|Availability |SUNWgnome-gvfs |
+-----------------------------+-----------------------------+
|Interface stability |Volatile |
+-----------------------------+-----------------------------+
SEE ALSO gvfs-copy(1), gvfs-info(1), gvfs-less(1), gvfs-ls(1), gvfs-mkdir(1)gvfs-monitor-dir(1), gvfs-monitor-file(1), gvfs-mount(1), gvfs-move(1),
gvfs-rename(1), gvfs-open(1), gvfs-rm(1), gvfs-save(1), gvfs-trash(1), gvfs-tree(1), attributes(5), environ(5)NOTES
Written by Alvaro Lopez Ortega, Sun Microsystems Inc., 2008.
SunOS 5.11 25 Mar 2008 gvfs-cat(1)