10 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
I have a variable and assigned the following values
***XYZ_201519_20150929140642_20150929140644_211_0_0_211
I need to read this variable from backward and stop read when I get first underscore (_)
In this scenario I should get 211
Thanks
Kris (3 Replies)
Discussion started by: mkris
3 Replies
2. Programming
I need to save part of a file to a different one, start and end offset bytes are provided by two counters in long format. If the difference is big, how should I do it to prevent buffer overflow in java? (7 Replies)
Discussion started by: Tribe
7 Replies
3. Shell Programming and Scripting
I have two files. File1 is shown below.
>153L:B|PDBID|CHAIN|SEQUENCE
RTDCYGNVNRIDTTGASCKTAKPEGLSYCGVSASKKIAERDLQAMDRYKTIIKKVGEKLCVEPAVIAGIISRESHAGKVL
KNGWGDRGNGFGLMQVDKRSHKPQGTWNGEVHITQGTTILINFIKTIQKKFPSWTKDQQLKGGISAYNAGAGNVRSYARM
DIGTTHDDYANDVVARAQYYKQHGY
>16VP:A|PDBID|CHAIN|SEQUENCE... (7 Replies)
Discussion started by: nelsonfrans
7 Replies
4. Shell Programming and Scripting
Hello to all,
I would like to search sequences of bytes inside big binary file.
The bin file contains blocks of information, each block begins is estructured as follow:
1- Each block begins with the hex 32 (1 byte) and ends with FF. After the FF of the last block, it follows 33.
2- Next... (59 Replies)
Discussion started by: Ophiuchus
59 Replies
5. Shell Programming and Scripting
Hello All,
I need to extract part of a file into a new file
My file is
Define schema xxxxxx
Insert into table
(
a
,b
,c
,d
)
values
(
1,
2,
3, (15 Replies)
Discussion started by: nnani
15 Replies
6. Shell Programming and Scripting
I have a fastq file from small RNA sequencing with sequence lengths between 15 - 30. I wanted to filter sequence lengths between 21-25 and write to another fastq file. how can i do that? (4 Replies)
Discussion started by: empyrean
4 Replies
7. Shell Programming and Scripting
Hi,
I have a file with more than 28000 records and it looks like below..
>mm10_refflat_ABCD range=chr1:1234567-2345678
tgtgcacactacacatgactagtacatgactagac....so on
>mm10_refflat_BCD range=chr1:3234567-4545678...
tgtgcacactacacatgactagtatgtgcacactacacatgactagta
.
.
.
.
.
so on
... (2 Replies)
Discussion started by: Diya123
2 Replies
8. Shell Programming and Scripting
I need to extract the following lines from this text and put it in different files.
From xxxx@gmail.com Thu Jun 10 21:15:46 2010
Return-Path: <xxxxx@gmail.com>
X-Original-To: xxx@localhost
Delivered-To:xxxx@localhost
Received: from ubuntu (localhost )
by ubuntu (Postfix) with ESMTP... (11 Replies)
Discussion started by: waxo
11 Replies
9. Shell Programming and Scripting
Hi there,
I'm having some problem with UNIX scripting (ksh), perhaps somebody can help me out?
For example:
------------
Sample content of my log file (text file):
--------------------------------------
File1: ....
info_1 ...
info_2 ...
info_3 ...
File2: ....
info_1 ...
info_2 ...... (10 Replies)
Discussion started by: superHonda123
10 Replies
10. UNIX for Dummies Questions & Answers
Hi,
I want to extract a part of filename and pass it as a parameter to one of the scripts. Could someone help.
File name:-
NLL_NAM_XXXXX.XXXXXXX_1_1.txt.
Here i have to extract only XXXXX.XXXXXXX and the position will be constant. that means that i have to extract some n characters from... (6 Replies)
Discussion started by: dnat
6 Replies