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fahash(1) [debian man page]

FAHASH(1)							   User Commands							 FAHASH(1)

NAME
fahash - sequence hash builder for reverse e-PCR SYNOPSIS
fahash [-hV] -b hash-file [-w wdsize] [-f period] [-F fragment_min,fragment_max] [-k] [-c cachesize] [-v 1|2] famap-file ... fahash [-hV] -T hash-file [-o outfile] DESCRIPTION
The program fahash is part of the e-PCR suite and is used to build hash-files, and output word usage statistics for reverse e-PCR searches. OPTIONS
-b hash-file Build hash tables (hash-file) from sequence files, -T hash-file Print word usage statistics for hash-file -o outfile Write output to file `outfile' build-options: -w wordsize Set word size when building hash tables -f period Set discontiguity when building hash tables -k Skip repeats when building hash-file -F min,max Set watermarks for fragment size (in Mb) (version 1 only) -c cachesize Set cache size (version 2 only) -v ver Use format version (1|2, 2 is default) EXAMPLE
famap -tN -b genome.famap org/chr_*.fa fahash -b genome.hash -w 12 -f3 ${PWD}/genome.famap re-PCR -s genome.hash -n1 -g1 ACTATTGATGATGA AGGTAGATGTTTTT 120-200 See famap(1) and re-pcr(1) SEE ALSO
/usr/share/doc/ncbi-epcr/README.txt bioperl(1), e-pcr(1), famap(1) and re-pcr(1) AUTHORS
This manual page was written by Andreas Tille <tille@debian.org> for the Debian system (but may be used by others). Permission is granted to copy, distribute and/or modify this document under the terms of the GNU General Public License, Version 2 any later version published by the Free Software Foundation. On Debian systems, the complete text of the GNU General Public License can be found in /usr/share/common-licenses/GPL. Reverse e-PCR: sequence hash builder version 2.3.9 April 2008 FAHASH(1)

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TB_POLGEN(8)							   User Manuals 						      TB_POLGEN(8)

NAME
tb_polgen - manage tboot verified launch policy SYNOPSIS
tb_polgen COMMAND [OPTION] DESCRIPTION
tb_polgen is used to manage tboot verified launch policy. COMMANDS
--create Create an empty tboot verified launch policy file. --type nonfatal | continue | halt Nonfatal means ignoring all non-fatal errors and continuing. Continue means ignoring verification errors and halting other- wise. Halt means halting on any errors. [--ctrl policy-control-value] The default value 1 is to extend policy into PCR 17. policy-file --add Add a module hash entry into a policy file. --num module-number | any The module-number is the 0-based module number corresponding to modules loaded by the bootloader. --pcr TPM-PCR-number | none The TPM-PCR-number is the PCR to extend the module's measurement into. --hash any | image [--cmdline command-line] The command line is from grub.conf, and it should not include the module name (e.g. "/xen.gz"). [--image image-file-name] policy-file --del Delete a module hash entry from a policy file. --num module-number | any The module-number is the 0-based module number corresponding to modules loaded by the bootloader. [--pos hash-number] The hash-number is the 0-based index of the hash, within the list of hashes for the specified module. policy-file --unwrap Extract the tboot verified launch policy from a TXT LCP element file. --elt elt-file policy-file --show policy-file Show the policy information in a policy file. --help Print out the help message. --verbose Enable verbose output; can be specified with any command. EXAMPLES
tb_polgen --create --type nonfatal vl.pol tb_polgen --add --num 0 --pcr none --hash image --cmdline "cmdline" --image /boot/xen.gz vl.pol tb_polgen --add --num 1 --pcr 19 --hash image --cmdline "cmdline" --image /boot/vmlinuz-2.6.18.8-xen vl.pol tb_polgen --add --num 2 --pcr 19 --hash image --cmdline "" --image /boot/initrd-2.6.18.8-xen.img vl.pol tb_polgen --del --num 1 vl.pol tb_polgen --show --verbose vl.pol Note1: It is not necessary to specify a PCR for module 0, since this module's measurement will always be extended to PCR 18. If a PCR is speci- fied, then the measurement will be extended to that PCR in addition to PCR 18. Note2: --unwrap is not implemented correctly. There should be a defined UUID for this and that should be checked before copying the data. There should be a wrap or similar command to generates an element file for a policy. SEE ALSO
lcp_crtpol(8), lcp_crtpol2(8), lcp_crtpolelt(8). tboot 2011-12-31 TB_POLGEN(8)
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