10 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
Brand new to these forums, and I hope that someone can help me out.
I'm trying to run the following command in UNIX
java -jar GenomeAnalysisTK.jar -T SplitSamFile -dt NONE -R reference.fa -I my.bam --outputRoot /my/path/SampleFiles/Sample_
It executes the SplitSamFile from GATK, but I... (3 Replies)
Discussion started by: Wixaros
2. UNIX for Dummies Questions & Answers
I am working in support and we are planning to automate a system to reduce the direct manual intervention to core system.
Please find the below details.
1. we have a web application that runs on Windows Platform.
2. From web application, we need to connect to remote Unix machine.... (6 Replies)
Discussion started by: Balaji K
3. Shell Programming and Scripting
I have to create two instances of jBoss 5.1.0 GA. In order to do that I have to execute the following in start-jboss.sh:
find . -exec /opt/novell/idm/jboss/bin/run.sh -Djboss.service.binding.set=ports-01 -c IDMProv -b 0.0.0.0 \; -exec /opt/novell/idm/jboss/bin/run.sh... (4 Replies)
Discussion started by: Joydeep Ghosh
Im trying to excute a command from Java and direct the output to the main output screen or to another file .... can you please help with this ? can I use filewriter for this ?
Here is my code....
import java.io.FileWriter;... (3 Replies)
Discussion started by: yahyaaa
5. Shell Programming and Scripting
I want to write a script which would run from one host say A and connect to other remote host B and then run rest of commands in that host. I tried connecting from A host to B with SSH but after connecting to host B it just getting me inside Host B command prompt. Rest of the script is not running... (6 Replies)
Discussion started by: SN2009
6. UNIX for Dummies Questions & Answers
How to run UNIX commands for practice in Windows 2000 OS?
If you suggest to install Cygwin, please let me know the procedure to install, or else I feel happy if you suggest any stand alone app for running UNIX commands..:) (2 Replies)
Discussion started by: Srikanthk
7. UNIX for Dummies Questions & Answers
It would be helpful if someone could help me out here. The problem I have been having is that I cannot run some commands which are valid - whenever I try to run the command I get the message "command not found". Now, if I run the same command as root it executes. These commands do not have to be... (5 Replies)
Discussion started by: BigTool4u2
8. Shell Programming and Scripting
I have a question of how to run commands from a variable where there are more than one commands in the variable under bash.
I ran the following commands under bash
> command="ls /etc/zshrc; ls /etc/zshenv"
The results were:
ls: /etc/zshrc;: No such file or directory
ls: ls:... (1 Reply)
Discussion started by: pankai
9. Shell Programming and Scripting
I am having one situation in which I need to run some simple unix commands after doing "chroot" command in a shell script. Which in turn creates a new shell.
So scenario is that
- I need to have one shell script which is ran as a part of crontab
- in this shell script I need to do a... (2 Replies)
Discussion started by: hkapil
10. UNIX for Dummies Questions & Answers
What would be the best way to setup for a Linux box to run a few commands before the user logs in? (1 Reply)
Discussion started by: woofie