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Top Forums UNIX for Beginners Questions & Answers How to append strings with whitespace? Post 303038448 by bunny_merah19 on Tuesday 3rd of September 2019 09:56:48 AM
Old 09-03-2019
Quote:
Originally Posted by anbu23
Code:
$ sed -e 's/[^\t]*id/& \ /g' -e 's/[^\t]*alias_./& \ /g' file
Chr1    lnci    exon    83801516        83803251        .       -       .       gene_id  "LINC01725";   transcript_id  "LINC01725:44";    gene_alias_1  "ENSG00000233008";        gene_alias_2  "RP11-475O6.1";   gene_alias_3  "ENSG00000233008.1";gene_alias_4  "OTTHUMG00000009930.1";   gene_alias_5  "ENSG00000233008.5";      gene_alias_6  "LINC01725";      gene_alias_7  "LOC101927560";     transcript_alias_1  "ENST00000457273";  transcript_alias_2  "ENST00000457273.1";        transcript_alias_3  "RP11-475O6.1-005";   transcript_alias_4  "OTTHUMT00000027496.1";     transcript_alias_5  "NONHSAT004171";    transcript_alias_6  "NR_119374";  transcript_alias_7  "ENST00000457273.5";        transcript_alias_8  "NR_119374.1";
chr16   lnci    exon    83849907        83850022        .       -       .       gene_id  "LINC01725";   transcript_id  "LINC01725:44";    gene_alias_1  "ENSG00000233008";        gene_alias_2  "RP11-475O6.1";   gene_alias_3  "ENSG00000233008.1";gene_alias_4  "OTTHUMG00000009930.1";

Sorry, it still did not work on my actual data. It worked for "transcript_alias_#" but it created 2 whitespaces. I just need 1 whitespace. and It did not work for "gene_alias_#" at all. Also, it created whitespaces at wrong location. for instance,

Code:
gene_alias_1  0"LOC101928035";   it supposed to be gene_alias_10 "LOC101928035";

thanks

Last edited by bunny_merah19; 09-03-2019 at 11:31 AM..
 

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IRSEND(1)							   User Commands							 IRSEND(1)

NAME
irsend - basic LIRC program to send infra-red commands SYNOPSIS
irsend [options] DIRECTIVE REMOTE CODE [CODE...] DESCRIPTION
Asks the lircd daemon to send one or more CIR (Consumer Infra-Red) commands. This is intended for remote control of electronic devices such as TV boxes, HiFi sets, etc. DIRECTIVE can be: SEND_ONCE - send CODE [CODE ...] once SEND_START - start repeating CODE SEND_STOP - stop repeating CODE LIST - list configured remote items SET_TRANSMITTERS - set transmitters NUM [NUM ...] SIMULATE - simulate IR event REMOTE is the name of a remote, as described in the lircd configuration file. CODE is the name of a remote control key of REMOTE, as it appears in the lircd configuration file. NUM is the transmitter number of the hardware device. For the LIST DIRECTIVE, REMOTE and/or CODE can be empty: LIST "" "" - list all configured remote names LIST REMOTE "" - list all codes of REMOTE LIST REMOTE CODE - list only CODE of REMOTE The SIMULATE command only works if it has been explicitly enabled in lircd. -h --help display usage summary -v --version display version -d --device use given lircd socket [/var/run/lirc/lircd] -a --address=host[:port] connect to lircd at this address -# --count=n send command n times EXAMPLES
irsend LIST DenonTuner "" irsend SEND_ONCE DenonTuner PROG-SCAN irsend SEND_ONCE OnkyoAmpli VOL-UP VOL-UP VOL-UP VOL-UP irsend SEND_START OnkyoAmpli VOL-DOWN ; sleep 3 irsend SEND_STOP OnkyoAmpli VOL-DOWN irsend SET_TRANSMITTERS 1 irsend SET_TRANSMITTERS 1 3 4 irsend SIMULATE "0000000000000476 00 OK TECHNISAT_ST3004S" FILES
/etc/lirc/lircd.conf Default lircd configuration file. It should contain all the remotes, their infra-red codes and the corresponding timing and wave- form details. DIAGNOSTICS
If lircd is not running (or /var/run/lirc/lircd lacks write permissions) irsend aborts with the following diagnostics: "irsend: could not connect to socket" "irsend: Connection refused" (or "Permission denied"). SEE ALSO
The documentation for lirc is maintained as html pages. They are located under html/ in the documentation directory. lircd(8), mode2(1), smode2(1), xmode2(1), irrecord(1), irw(1), http://www.lirc.org. irsend 0.9.0-pre1 October 2010 IRSEND(1)
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