Trying to use awk to add a . to $4. The input and output is tab-delimeted, but the awk seems to add a . in front of $5 and is space-delimeted. It seems close, but I am not able to produce the desired output. Thank you .
Hi Everyone,
a.txt
a b c 1 e e e e e
a b c 2 e e e e e
the output is
a b c 1 e e e e e
a 00b c 2 e e e e e
when 4th field = '2', then add '00' in the front of 2nd field value.
Thanks (9 Replies)
I need to replace specific field (x) in a table with new value (y):
Input:
1 2 3 4
5 x 6 7
8 9 0 0
Output:
1 2 3 4
5 y 6 7
8 9 0 0
I have no idea how to do this. (10 Replies)
I'm trying to update a text file via sed/awk, after a lot of searching I still can't find a code snippet that I can get to work.
Brief overview:
I have user input a line to a variable, I then find a specific value in this line 10th field in this case. After asking for new input and doing some... (14 Replies)
Hello,
i need help with awk.
I have this file:
cat number
DirB port 67 er_enc_out 0 er_bad_os 0
DirB port 71 er_enc_out 56 er_bad_os 0
DirB port 74 er_enc_out 0 er_bad_os 0
DirB port 75 ... (4 Replies)
Hi,
I have a file like below
PRUM,67016800 ,CC ,C1,67016800 , ,Y,Y,2 ,CK,BX,FOX ,00000001,EA,00000001,20141120 00:00:00, ,N,Y,Y,CK ABCDEF... (7 Replies)
Gents,
I have many files to change increasing 40000 in specific field.
Can you help me with a command with sed or awk to fix this problem.
Where the the field has Marker FDU. I need to add 40000 plus
example
Marker FDU 27152.00
Marker FDU 67152.00
I should... (4 Replies)
I am trying to add a tab after the last digit in $3 in the input. The grep below is all I can think off. Thank you :)
sed -n 's/:/&/p' input
input
chr1 955542 955763AGRN-6|gc=75
chr1 957570 957852AGRN-7|gc=61.2
chr1 976034 976270AGRN-9|gc=74.5
desired output
chr1... (5 Replies)
I have tab delimited input that prints out in the format below:
I am trying to add field headers to $5 and $6. Not sure if sed is the best tool but my attempt is below. Thank you :).
$5 = REF
$6 = ALT
file
ID CHR START STOP
123 1 100 200 A ... (6 Replies)
I am trying to use awk to match the NM_ in file with $1 of id which is tab-delimited. The NM_ will always be in the line of file that starts with > and be after the second _. When there is a match between each NM_ and id, then the value of $2 in id is substituted or used to update the NM_. Each NM_... (3 Replies)
In the awk below which does execute I get output that is close, except for all the lines that start with a # are removed. Some lines have one others two or three and after the script adds the
ID= to the fields below the pattern in the awk, I can not seem to add the # lines back to the output. ... (5 Replies)
Discussion started by: cmccabe
5 Replies
LEARN ABOUT V7
join
JOIN(1) General Commands Manual JOIN(1)NAME
join - relational database operator
SYNOPSIS
join [ options ] file1 file2
DESCRIPTION
Join forms, on the standard output, a join of the two relations specified by the lines of file1 and file2. If file1 is `-', the standard
input is used.
File1 and file2 must be sorted in increasing ASCII collating sequence on the fields on which they are to be joined, normally the first in
each line.
There is one line in the output for each pair of lines in file1 and file2 that have identical join fields. The output line normally con-
sists of the common field, then the rest of the line from file1, then the rest of the line from file2.
Fields are normally separated by blank, tab or newline. In this case, multiple separators count as one, and leading separators are dis-
carded.
These options are recognized:
-an In addition to the normal output, produce a line for each unpairable line in file n, where n is 1 or 2.
-e s Replace empty output fields by string s.
-jn m Join on the mth field of file n. If n is missing, use the mth field in each file.
-o list
Each output line comprises the fields specifed in list, each element of which has the form n.m, where n is a file number and m is a
field number.
-tc Use character c as a separator (tab character). Every appearance of c in a line is significant.
SEE ALSO sort(1), comm(1), awk(1)BUGS
With default field separation, the collating sequence is that of sort -b; with -t, the sequence is that of a plain sort.
The conventions of join, sort, comm, uniq, look and awk(1) are wildly incongruous.
JOIN(1)
11-17-2016
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