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Top Forums Shell Programming and Scripting Bash to add folder to exsisting folders in directory Post 302982775 by Don Cragun on Monday 3rd of October 2016 10:46:38 PM
Old 10-03-2016
It seems that you would want to replace the bold code by one or more:
Code:
        mkdir -p "$D/possibly_missing_directory" ...

commands. Given differences in case, differences in leading hyphens and/or spaces, and confusing uses of commas (sometimes separating lists of directories to be created and sometimes apparently being part of the name of a directory being created [<space>annovar,<space>stats]), I am not going to try to guess at which actual mkdir commands you need to do what you really want to do.
 

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MKDIR(1)							   User Commands							  MKDIR(1)

NAME
mkdir - make directories SYNOPSIS
mkdir [OPTION]... DIRECTORY... DESCRIPTION
Create the DIRECTORY(ies), if they do not already exist. Mandatory arguments to long options are mandatory for short options too. -m, --mode=MODE set file mode (as in chmod), not a=rwx - umask -p, --parents no error if existing, make parent directories as needed -v, --verbose print a message for each created directory -Z, --context[=CTX] set the SELinux security context of each created directory to default type or to CTX if specified --help display this help and exit --version output version information and exit GNU coreutils online help: <http://www.gnu.org/software/coreutils/> Report mkdir translation bugs to <http://translationproject.org/team/> AUTHOR
Written by David MacKenzie. COPYRIGHT
Copyright (C) 2013 Free Software Foundation, Inc. License GPLv3+: GNU GPL version 3 or later <http://gnu.org/licenses/gpl.html>. This is free software: you are free to change and redistribute it. There is NO WARRANTY, to the extent permitted by law. SEE ALSO
mkdir(2) The full documentation for mkdir is maintained as a Texinfo manual. If the info and mkdir programs are properly installed at your site, the command info coreutils 'mkdir invocation' should give you access to the complete manual. GNU coreutils 8.22 June 2014 MKDIR(1)
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