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Full Discussion: Looping through input/output
Top Forums UNIX for Beginners Questions & Answers Looping through input/output Post 302979861 by zajtat on Friday 19th of August 2016 11:48:42 PM
Old 08-20-2016
Looping through input/output

Hi,

I've got a directory of about 6000 txt files that look like this:

Code:
a b c d
e f g h
k l m n

I need to execute a command on them to combine them and, in the end, have one big file with all the needed columns taken form all the 6000 files. I've got the "combining" program, but my problem is that once I've combined the first two files that output file should be the input file for adding the third one and so on.
Here is a schematic:

Code:
combining.executable infile1 infile2 > outfile1
combining.executable infile3 outfile1 > outfile2
combining.executable infile4 outfile2 > outfile3
combining.executable infile5 outfile3 > outfile4
etc

I've created a list of all the files than need to be combined (named master-infile) and wrote this loop:

Code:
for i in $(cat master-infile);
do
   for((a=1;a<=6000;i++);
   do
      combining.executable ${i} ${i} > ${a}
   done
done

But the looping variables seem to be all wrong and all sorts of weird combinations of files get combined. I guess I need to get a count of output files? Any ideas?

Any help would be greatly appreciated!

Last edited by vbe; 08-20-2016 at 10:55 AM.. Reason: icode tags => code tags
 

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pods::SDL::GFX::ImageFilter(3pm)			User Contributed Perl Documentation			  pods::SDL::GFX::ImageFilter(3pm)

NAME
SDL::GFX::ImageFilter - image filtering functions CATEGORY
TODO, GFX METHODS
MMX_detect int gfx_image_MMX_detect() CODE: SDL_imageFilterMMXdetect(); MMX_off void gfx_image_MMX_off() CODE: SDL_imageFilterMMXoff(); MMX_on void gfx_image_MMX_on() CODE: SDL_imageFilterMMXon(); add int gfx_image_add(Src1, Src2, Dest, length) unsigned char *Src1 unsigned char *Src2 unsigned char *Dest int length CODE: RETVAL = SDL_imageFilterAdd(Src1, Src2, Dest, length); OUTPUT: RETVAL mean int gfx_image_mean(Src1, Src2, Dest, length) unsigned char *Src1 unsigned char *Src2 unsigned char *Dest int length CODE: RETVAL = SDL_imageFilterMean(Src1, Src2, Dest, length); OUTPUT: RETVAL sub int gfx_image_sub(Src1, Src2, Dest, length) unsigned char *Src1 unsigned char *Src2 unsigned char *Dest int length CODE: RETVAL = SDL_imageFilterSub(Src1, Src2, Dest, length); OUTPUT: RETVAL abs_diff int gfx_image_abs_diff(Src1, Src2, Dest, length) unsigned char *Src1 unsigned char *Src2 unsigned char *Dest int length CODE: RETVAL = SDL_imageFilterAbsDiff(Src1, Src2, Dest, length); OUTPUT: RETVAL mult int gfx_image_mult(Src1, Src2, Dest, length) unsigned char *Src1 unsigned char *Src2 unsigned char *Dest int length CODE: RETVAL = SDL_imageFilterMult(Src1, Src2, Dest, length); OUTPUT: RETVAL mult_nor int gfx_image_mult_nor(Src1, Src2, Dest, length) unsigned char *Src1 unsigned char *Src2 unsigned char *Dest int length CODE: RETVAL = SDL_imageFilterMultNor(Src1, Src2, Dest, length); OUTPUT: RETVAL mult_div_by_2 int gfx_image_mult_div_by_2(Src1, Src2, Dest, length) unsigned char *Src1 unsigned char *Src2 unsigned char *Dest int length CODE: RETVAL = SDL_imageFilterMultDivby2(Src1, Src2, Dest, length); OUTPUT: RETVAL mult_div_by_4 int gfx_image_mult_div_by_4(Src1, Src2, Dest, length) unsigned char *Src1 unsigned char *Src2 unsigned char *Dest int length CODE: RETVAL = SDL_imageFilterMultDivby4(Src1, Src2, Dest, length); OUTPUT: RETVAL bit_and int gfx_image_bit_and(Src1, Src2, Dest, length) unsigned char *Src1 unsigned char *Src2 unsigned char *Dest int length CODE: RETVAL = SDL_imageFilterBitAnd(Src1, Src2, Dest, length); OUTPUT: RETVAL bit_or int gfx_image_bit_or(Src1, Src2, Dest, length) unsigned char *Src1 unsigned char *Src2 unsigned char *Dest int length CODE: RETVAL = SDL_imageFilterBitOr(Src1, Src2, Dest, length); OUTPUT: RETVAL div int gfx_image_div(Src1, Src2, Dest, length) unsigned char *Src1 unsigned char *Src2 unsigned char *Dest int length CODE: RETVAL = SDL_imageFilterDiv(Src1, Src2, Dest, length); OUTPUT: RETVAL bit_negation int gfx_image_bit_negation(Src1, Dest, length) unsigned char *Src1 unsigned char *Dest int length CODE: RETVAL = SDL_imageFilterBitNegation(Src1, Dest, length); OUTPUT: RETVAL add_byte int gfx_image_add_byte(Src1, Dest, length, C) unsigned char *Src1 unsigned char *Dest int length unsigned char C CODE: RETVAL = SDL_imageFilterAddByte(Src1, Dest, length, C); OUTPUT: RETVAL add_uint int gfx_image_add_uint(Src1, Dest, length, C) unsigned char *Src1 unsigned char *Dest int length unsigned int C CODE: RETVAL = SDL_imageFilterAddUint(Src1, Dest, length, C); OUTPUT: RETVAL add_byte_to_half int gfx_image_add_byte_to_half(Src1, Dest, length, C) unsigned char *Src1 unsigned char *Dest int length unsigned char C CODE: RETVAL = SDL_imageFilterAddByteToHalf(Src1, Dest, length, C); OUTPUT: RETVAL sub_byte int gfx_image_sub_byte(Src1, Dest, length, C) unsigned char *Src1 unsigned char *Dest int length unsigned char C CODE: RETVAL = SDL_imageFilterSubByte(Src1, Dest, length, C); OUTPUT: RETVAL sub_uint int gfx_image_sub_uint(Src1, Dest, length, C) unsigned char *Src1 unsigned char *Dest int length unsigned int C CODE: RETVAL = SDL_imageFilterSubUint(Src1, Dest, length, C); OUTPUT: RETVAL shift_right int gfx_image_shift_right(Src1, Dest, length, N) unsigned char *Src1 unsigned char *Dest int length unsigned char N CODE: RETVAL = SDL_imageFilterShiftRight(Src1, Dest, length, N); OUTPUT: RETVAL shift_right_uint int gfx_image_shift_right_uint(Src1, Dest, length, N) unsigned char *Src1 unsigned char *Dest int length unsigned char N CODE: RETVAL = SDL_imageFilterShiftRightUint(Src1, Dest, length, N); OUTPUT: RETVAL mult_by_byte int gfx_image_mult_by_byte(Src1, Dest, length, C) unsigned char *Src1 unsigned char *Dest int length unsigned char C CODE: RETVAL = SDL_imageFilterMultByByte(Src1, Dest, length, C); OUTPUT: RETVAL shift_right_and_mult_by_byte int gfx_image_shift_right_and_mult_by_byte(Src1, Dest, length, N, C) unsigned char *Src1 unsigned char *Dest int length unsigned char N unsigned char C CODE: RETVAL = SDL_imageFilterShiftRightAndMultByByte(Src1, Dest, length, N, C); OUTPUT: RETVAL shift_left_byte int gfx_image_shift_left_byte(Src1, Dest, length, N) unsigned char *Src1 unsigned char *Dest int length unsigned char N CODE: RETVAL = SDL_imageFilterShiftLeftByte(Src1, Dest, length, N); OUTPUT: RETVAL shift_left_uint int gfx_image_shift_left_uint(Src1, Dest, length, N) unsigned char *Src1 unsigned char *Dest int length unsigned char N CODE: RETVAL = SDL_imageFilterShiftLeftUint(Src1, Dest, length, N); OUTPUT: RETVAL shift_left int gfx_image_shift_left(Src1, Dest, length, N) unsigned char *Src1 unsigned char *Dest int length unsigned char N CODE: RETVAL = SDL_imageFilterShiftLeft(Src1, Dest, length, N); OUTPUT: RETVAL binarize_using_threshold int gfx_image_binarize_using_threshold(Src1, Dest, length, T) unsigned char *Src1 unsigned char *Dest int length unsigned char T CODE: RETVAL = SDL_imageFilterBinarizeUsingThreshold(Src1, Dest, length, T); OUTPUT: RETVAL clip_to_range int gfx_image_clip_to_range(Src1, Dest, length, Tmin, Tmax) unsigned char *Src1 unsigned char *Dest int length unsigned char Tmin unsigned char Tmax CODE: RETVAL = SDL_imageFilterClipToRange(Src1, Dest, length, Tmin, Tmax); OUTPUT: RETVAL normalize_linear int gfx_image_normalize_linear(Src1, Dest, length, Cmin, Cmax, Nmin, Nmax) unsigned char *Src1 unsigned char *Dest int length int Cmin int Cmax int Nmin int Nmax CODE: RETVAL = SDL_imageFilterNormalizeLinear(Src1, Dest, length, Cmin, Cmax, Nmin, Nmax); OUTPUT: RETVAL convolve_kernel_3x3_divide int gfx_image_convolve_kernel_3x3_divide(Src, Dest, rows, columns, Kernel, Divisor) unsigned char *Src unsigned char *Dest int rows int columns Sint16 *Kernel unsigned char Divisor CODE: RETVAL = SDL_imageFilterConvolveKernel3x3Divide(Src, Dest, rows, columns, Kernel, Divisor); OUTPUT: RETVAL convolve_kernel_5x5_divide int gfx_image_convolve_kernel_5x5_divide(Src, Dest, rows, columns, Kernel, Divisor) unsigned char *Src unsigned char *Dest int rows int columns Sint16 *Kernel unsigned char Divisor CODE: RETVAL = SDL_imageFilterConvolveKernel5x5Divide(Src, Dest, rows, columns, Kernel, Divisor); OUTPUT: RETVAL convolve_kernel_7x7_divide int gfx_image_convolve_kernel_7x7_divide(Src, Dest, rows, columns, Kernel, Divisor) unsigned char *Src unsigned char *Dest int rows int columns Sint16 *Kernel unsigned char Divisor CODE: RETVAL = SDL_imageFilterConvolveKernel7x7Divide(Src, Dest, rows, columns, Kernel, Divisor); OUTPUT: RETVAL convolve_kernel_9x9_divide int gfx_image_convolve_kernel_9x9_divide(Src, Dest, rows, columns, Kernel, Divisor) unsigned char *Src unsigned char *Dest int rows int columns Sint16 *Kernel unsigned char Divisor CODE: RETVAL = SDL_imageFilterConvolveKernel9x9Divide(Src, Dest, rows, columns, Kernel, Divisor); OUTPUT: RETVAL convolve_kernel_3x3_shift_right int gfx_image_convolve_kernel_3x3_shift_right(Src, Dest, rows, columns, Kernel, NRightShift) unsigned char *Src unsigned char *Dest int rows int columns Sint16 *Kernel unsigned char NRightShift CODE: RETVAL = SDL_imageFilterConvolveKernel3x3ShiftRight(Src, Dest, rows, columns, Kernel, NRightShift); OUTPUT: RETVAL convolve_kernel_5x5_shift_right int gfx_image_convolve_kernel_5x5_shift_right(Src, Dest, rows, columns, Kernel, NRightShift) unsigned char *Src unsigned char *Dest int rows int columns Sint16 *Kernel unsigned char NRightShift CODE: RETVAL = SDL_imageFilterConvolveKernel5x5ShiftRight(Src, Dest, rows, columns, Kernel, NRightShift); OUTPUT: RETVAL convolve_kernel_7x7_shift_right int gfx_image_convolve_kernel_7x7_shift_right(Src, Dest, rows, columns, Kernel, NRightShift) unsigned char *Src unsigned char *Dest int rows int columns Sint16 *Kernel unsigned char NRightShift CODE: RETVAL = SDL_imageFilterConvolveKernel7x7ShiftRight(Src, Dest, rows, columns, Kernel, NRightShift); OUTPUT: RETVAL convolve_kernel_9x9_shift_right int gfx_image_convolve_kernel_9x9_shift_right(Src, Dest, rows, columns, Kernel, NRightShift) unsigned char *Src unsigned char *Dest int rows int columns Sint16 *Kernel unsigned char NRightShift CODE: RETVAL = SDL_imageFilterConvolveKernel9x9ShiftRight(Src, Dest, rows, columns, Kernel, NRightShift); OUTPUT: RETVAL sobel_x int gfx_image_sobel_x(Src, Dest, rows, columns) unsigned char *Src unsigned char *Dest int rows int columns CODE: RETVAL = SDL_imageFilterSobelX(Src, Dest, rows, columns); OUTPUT: RETVAL sobel_x_shift_right int gfx_image_sobel_x_shift_right(Src, Dest, rows, columns, NRightShift) unsigned char *Src unsigned char *Dest int rows int columns unsigned char NRightShift CODE: RETVAL = SDL_imageFilterSobelXShiftRight(Src, Dest, rows, columns, NRightShift); OUTPUT: RETVAL align_stack void gfx_image_align_stack() CODE: SDL_imageFilterAlignStack(); restore_stack void gfx_image_restore_stack() CODE: SDL_imageFilterRestoreStack(); AUTHORS
See "AUTHORS" in SDL. perl v5.14.2 2012-05-28 pods::SDL::GFX::ImageFilter(3pm)
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