Sponsored Content
Top Forums Shell Programming and Scripting Help: Counting values less than a number Post 302974087 by Alexandryne on Wednesday 25th of May 2016 01:34:47 PM
Old 05-25-2016
Help: Counting values less than a number

So I have several files (35000, to be exact) in the format rmsd_protein_*.dat each with 2 columns and 35000 rows.

I would like to count how many values in the second column are less than 3 for each file, and output it into a new file so that it ultimately appears as:

Code:
1           14057
2           20598

.....

where the left column is the * value from the data file, and the number on the left is the number of values from that file less than three.

Unfortunately, I'm a n00b as far as shell scripts go, and even though this would be the easiest thing in the world in JAVA I just can't figure it out in scripts. Thoughts?

Last edited by Scrutinizer; 05-25-2016 at 03:08 PM.. Reason: code tags
 

10 More Discussions You Might Find Interesting

1. Linux

counting the number of lines

Hello, I have afile which begins with a few urls on multiple lines and then there is listing of some information on separate lines. The listing begins with the word Name on a given line followed by teh actual list. I want to count the number of lines in this file after the line having... (6 Replies)
Discussion started by: nayeemmz
6 Replies

2. UNIX for Dummies Questions & Answers

Counting number of occurences

Hi All, I have to count the number of occurences of the character " ; " in a given line. I had used the following awk command to achieve the same echo $KOP.dat|awk '{split($1,my,";"); for(i in my)c++ }END{print c-1}' My file KOP.dat had the following data ... (1 Reply)
Discussion started by: kingofprussia
1 Replies

3. Shell Programming and Scripting

counting the number of lines - again

Hi all, I use bash shell and I have a problem with wc. I would like to determine the number of lines in a file so I do wc -l filename but I don't want to get the filename again I just would like to have the number of lines and use it in a variable. Can anybody help? Thank you, (7 Replies)
Discussion started by: f_o_555
7 Replies

4. Shell Programming and Scripting

counting the number of occurences

say i've got a text file with >10million sequences: ssss ssss tttttt uuuuuu uuuuuu uuuuuu ... I'd like to convert the file so that the output will report the number of occurence right by each sequence: 2 ssss 2 ssss 1 tttttt 3 uuuuuu 3 uuuuuu 3 uuuuuu .... (3 Replies)
Discussion started by: johjoh
3 Replies

5. Shell Programming and Scripting

Counting number of commas(,) in a variable

Hi all, I am having problems counting commas (,) from a variable in shell scripting.. the variable contains similiar to: ID@NAME@DESCRIPTION,ID@NAME@DESCRIPTION, ..... It can go on and on.. So i need to count the number of sets i.e.( ID@NAME@DESCRIPTION is one set) and process the... (4 Replies)
Discussion started by: faelric
4 Replies

6. Shell Programming and Scripting

counting number of sentence

Hi all I want to count total numbers of sentences separated by fullstop (.) in different files under a directory at one go. Any help is appreciated. (3 Replies)
Discussion started by: my_Perl
3 Replies

7. Shell Programming and Scripting

counting number of pattern occurrences

Hi All, Is it possible to count number of occurrences of a pattern in a single record using awk?? for example: a line like this: abrsjdfhafa I want to count the number of a character occurrences. but still use the default RS, I don't want to set RS to single character. (1 Reply)
Discussion started by: ghoda2_10
1 Replies

8. Shell Programming and Scripting

counting lines containing two column field values with awk

Hello everybody, I'm trying to count the number of consecutive lines in a text file which have two distinctive column field values. These lines may appear in several line blocks within the file, but I only want a single block to be counted. This was my first approach to tackle the problem (I'm... (6 Replies)
Discussion started by: origamisven
6 Replies

9. Shell Programming and Scripting

Counting the number of characters

Hi all, Can someone help me in getting the following o/p I/p:... (7 Replies)
Discussion started by: Sri3001
7 Replies

10. Shell Programming and Scripting

[Solved] Counting The Number of Lines Between Values with Multiple Variables

Hey everyone, I have a bunch of lines with values in field 4 that I am interested in. If these values are between 1 and 3 I want it to count all these values to all be counted together and then have the computer print out LOW and the number of lines with those values in between 1 and 3,... (2 Replies)
Discussion started by: VagabondGold
2 Replies
HISTO(1)						      General Commands Manual							  HISTO(1)

NAME
histo - compute 1-dimensional histogram of N data columns SYNOPSIS
histo [-c][-p] xmin xmax nbins histo [-c][-p] imin imax DESCRIPTION
Histo bins columnular data on the standard input between the given minimum and maximum values. If three command line arguments are given, the third is taken as the number of data bins between the first two real numbers. If only two arguments are given, they are both assumed to be integers, and the number of data bins will be equal to their difference plus one. The bins are always of equal size. The output is N+1 columns of data (for N columns input), where the first column is the centroid of each division, and each row corresponds to the frequencies for each column around that value. If the -c option is present, then histo computes the cumulative histogram for each column instead of the straight frequencies. The upper value of each bin is printed also instead of the centroid. This may be useful in computing percentiles, for example. Values below the minimum specified are still counted in the cumulative total. The -p option tells histo to report the percentage of the total number of input lines rather than the absolute counts. In the case of a cumulative total, this yields the percentile values directly. Values above the maximum are counted as well as values below in this case. All input data is interpreted as real values, and columns must be white-space separated. If any value is less than the minimum or greater than the maximum, it will be ignored unless the -c option is specified. EXAMPLE
To count data values between -1 and 1 in 50 bins: histo -1 1 50 < input.dat To count frequencies of integers between 0 and 255: histo 0 255 < input.dat AUTHOR
Greg Ward SEE ALSO
cnt(1), neaten(1), rcalc(1), rlam(1), tabfunc(1), total(1) RADIANCE
9/6/96 HISTO(1)
All times are GMT -4. The time now is 09:18 AM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy