Sponsored Content
Top Forums Shell Programming and Scripting Loop over awk or passing parameter Post 302927330 by fat on Tuesday 2nd of December 2014 10:15:31 AM
Old 12-02-2014
Hi RudiC,

Thanks for your reply. Sorry I wasnt very clear.
Yes the "Given" is in a file.I want to parse multiple input files named "chr{n}_GEN2bim" where n comes from the first column of my "Given" file.

Thanks

SA
 

10 More Discussions You Might Find Interesting

1. Shell Programming and Scripting

Passing a variable to awk while in a shell for loop

I am a newbie to awk and c programming, however am not a unix newbie. However, I do need help with a kshell script I am writing. It is almost complete, the last step is killing me. Any help would be greatly appreciated. What I am trying to do is cat a text file that has usernames. Then, using... (2 Replies)
Discussion started by: synergy_texas
2 Replies

2. Shell Programming and Scripting

Passing a parameter to AWK

Hi All, I am trying to pass a parameter to AWK on my KSH shell prompt as below. var1=2 echo $var1 awk -v var2=${var1} '{print var2}' testfile.txt I am passing the input file (testfile) to awk to get some o/p. It is having 10 records. When I run AWK, it is throwing the following errors... (1 Reply)
Discussion started by: Raamc
1 Replies

3. Shell Programming and Scripting

Passing parameter in sed or awk commands to print for the specific line in a file

Hi, I am trying to print a specific line in a file through sed or awk. The line number will be passed as a parameter from the previous step. My code looks as below. TEMP3=`sed -n '$TEMP2p' $FILEPATH/Log.txt` $TEMP2, I am getting from the previous step which is a numerical value(eg:3). ... (2 Replies)
Discussion started by: satyasrin82
2 Replies

4. Shell Programming and Scripting

Reading a string and passing passing arguments to a while loop

I have an for loop that reads the following file cat param.cfg val1:env1:opt1 val2:env2:opt2 val3:env3:opt3 val4:env4:opt4 . . The for loop extracts the each line of the file so that at any one point, the value of i is val1:env1:opt1 etc... I would like to extract each... (19 Replies)
Discussion started by: goddevil
19 Replies

5. Shell Programming and Scripting

Error passing parameter in "sub" command in awk

I have to replace the pattern found in one file in another file with null/empty "" if found on the fields 3 or 4 ONLY File 1 ==== 10604747|Mxdef|9999|9999|9999|2012-03-04 00:00:59 10604747|Mcdef|8888|9999|8888|2012-03-04 00:00:59 . . . File 2 ==== 9999 8888 . . . Expected... (7 Replies)
Discussion started by: machomaddy
7 Replies

6. Shell Programming and Scripting

Problem passing a search pattern to AWK inside a script loop

Learning, stumbling! My progress in shell scripting is slow. Now I have this doubt: I have the following file (users.txt): AU0909,on AU0309,off AU0209,on AU0109,off And this file (userson.txt) AU0909 AU0209 AU0109 AU0309 I just want to set those users on userson.txt to "off" in... (14 Replies)
Discussion started by: quinestor
14 Replies

7. Shell Programming and Scripting

Passing parameter to script, and split the parameter

i am passing input parameter 'one_two' to the script , the script output should display the result as below one_1two one_2two one_3two if then echo " Usage : <$0> <DATABASE> " exit 0 else for DB in 1 2 3 do DBname=`$DATABASE | awk -F "_" '{print $1_${DB}_$2}` done fi (5 Replies)
Discussion started by: only4satish
5 Replies

8. Shell Programming and Scripting

Passing parameter to awk command

Hi, I have a situation where I need to create a SQL statement using Unix script for each value in first field (ID). The file looks like this. Id,TARGET_FIELD_NAME,SOURCE_FIELD_NAME 1,Test_Rate,Field1 1,Test_Factor,Field2 1,Test_Size,Field3 2,Test_Rate,Field4 2,Test_Factor,Field5... (3 Replies)
Discussion started by: kiranredz
3 Replies

9. UNIX for Dummies Questions & Answers

Passing shell script parameter value to awk command in side the script

I have a shell script (.sh) and I want to pass a parameter value to the awk command but I am getting exception, please assist. diff=$1$2.diff id=$2 new=new_$diff echo "My id is $1" echo "I want to sync for user account $id" ##awk command I am using is as below cat $diff |... (1 Reply)
Discussion started by: Sarita Behera
1 Replies

10. Shell Programming and Scripting

awk programming -Passing variable to awk for loop

Hi All, I am new to AWK programming. I have the following for loop in my awk program. cat printhtml.awk: BEGIN -------- <some code here> END{ ----------<some code here> for(N=0; N<H; N++) { for(M=5; M<D; M++) print "\t" D ""; } ----- } ... (2 Replies)
Discussion started by: ctrld
2 Replies
NPM-RUN-SCRIPT(1)														 NPM-RUN-SCRIPT(1)

NAME
npm-run-script - Run arbitrary package scripts SYNOPSIS
npm run-script <command> [--silent] [-- <args>...] alias: npm run DESCRIPTION
This runs an arbitrary command from a package's "scripts" object. If no "command" is provided, it will list the available scripts. run[-script] is used by the test, start, restart, and stop commands, but can be called directly, as well. When the scripts in the package are printed out, they're separated into lifecycle (test, start, restart) and directly-run scripts. As of ` https://blog.npmjs.org/post/98131109725/npm-2-0-0, you can use custom arguments when executing scripts. The special option -- is used by getopt https://goo.gl/KxMmtG to delimit the end of the options. npm will pass all the arguments after the -- directly to your script: npm run test -- --grep="pattern" The arguments will only be passed to the script specified after npm run and not to any pre or post script. The env script is a special built-in command that can be used to list environment variables that will be available to the script at run- time. If an "env" command is defined in your package, it will take precedence over the built-in. In addition to the shell's pre-existing PATH, npm run adds node_modules/.bin to the PATH provided to scripts. Any binaries provided by locally-installed dependencies can be used without the node_modules/.bin prefix. For example, if there is a devDependency on tap in your package, you should write: "scripts": {"test": "tap test/*.js"} instead of "scripts": {"test": "node_modules/.bin/tap test/*.js"} to run your tests. The actual shell your script is run within is platform dependent. By default, on Unix-like systems it is the /bin/sh command, on Windows it is the cmd.exe. The actual shell referred to by /bin/sh also depends on the system. As of ` https://github.com/npm/npm/releases/tag/v5.1.0 you can customize the shell with the script-shell configuration. Scripts are run from the root of the module, regardless of what your current working directory is when you call npm run. If you want your script to use different behavior based on what subdirectory you're in, you can use the INIT_CWD environment variable, which holds the full path you were in when you ran npm run. npm run sets the NODE environment variable to the node executable with which npm is executed. Also, if the --scripts-prepend-node-path is passed, the directory within which node resides is added to the PATH. If --scripts-prepend-node-path=auto is passed (which has been the default in npm v3), this is only performed when that node executable is not found in the PATH. If you try to run a script without having a node_modules directory and it fails, you will be given a warning to run npm install, just in case you've forgotten. You can use the --silent flag to prevent showing npm ERR! output on error. You can use the --if-present flag to avoid exiting with a non-zero exit code when the script is undefined. This lets you run potentially undefined scripts without breaking the execution chain. SEE ALSO
o npm help 7 scripts o npm help test o npm help start o npm help restart o npm help stop o npm help 7 config January 2019 NPM-RUN-SCRIPT(1)
All times are GMT -4. The time now is 05:03 PM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy