Sponsored Content
Full Discussion: Batch file and perl
Special Forums Windows & DOS: Issues & Discussions Batch file and perl Post 302926928 by cmccabe on Friday 28th of November 2014 01:24:41 PM
Old 11-28-2014
Batch file for bash with perl

I have created a windows batch file to run a bash with perl commands in it:


Code:
 @echo off

C:
chdir C:\cygwin\bin\

bash --login -c "./windows_annovar.pl"
exit 0

In the pl file attached the menu opens and the user makes a selection and cygwin closes. There are error messages on the screen but it closes too quickly to see them. How can I pause the batch file and keep it from closing so I can see the messages and being troubleshooting? Thank you Smilie.
 

9 More Discussions You Might Find Interesting

1. IP Networking

batch file

my requirment is i have to call a batch file from a c++ program that batch file is called with the argument as print.txt print.txt is a text file which should get printed on printer (any printer) when a batch file call is made 1) how to call a batch file in c++ 2) how to print the text... (1 Reply)
Discussion started by: ramneek
1 Replies

2. Programming

batch file

what is a command to call a batch file from a c++ program when called with the argument which is a text file, then how to print that text file on a printer. please help me with code if possible (3 Replies)
Discussion started by: ramneek
3 Replies

3. UNIX for Advanced & Expert Users

Batch file question

EDIT: Is this wrong thread? Hi I am on an Apple Mac and I am trying to run this batch file on my Mac and was wondering if anyone could tell me what a script that will make this run and work on my Mac. I was hoping that you could tell me the script in the shell format? So here's the batch... (4 Replies)
Discussion started by: Billy5555100
4 Replies

4. Shell Programming and Scripting

Batch file to remove double quotes from a file

Hi I have to create a windows batch file which will read an input file and remove "double quotes" from each line of the file. For eg.If input file name is abcd.csv and contents is : "asasd,123123,213213,asd" "esfrf,dsfsdf,234324,sdfsdf" Then the batch file should remove "" from the... (11 Replies)
Discussion started by: akashtcs
11 Replies

5. UNIX for Advanced & Expert Users

batch file

Hi all I am using tru64 Unix and I want a ready batch file which makes me to change all user passwords at the same time ,instead of changing everyone separately. Please could anyone help me to do that. bye. (1 Reply)
Discussion started by: ahmedbashir
1 Replies

6. Shell Programming and Scripting

Executing a batch of files within a shell script with option to refire the individual files in batch

Hello everyone. I am new to shell scripting and i am required to create a shell script, the purpose of which i will explain below. I am on a solaris server btw. Before delving into the requirements, i will give youse an overview of what is currently in place and its purpose. ... (2 Replies)
Discussion started by: goddevil
2 Replies

7. Shell Programming and Scripting

Perl: batch replace a portion of text in files

Hi all, What I would like to achieve is to batch change the code below in every pdf in a given directory (each pdf is uncompressed so that can be easily edited). An example of the javascript code: if (this.hostContainer) { try { this.hostContainer.postMessage(pp_216', 15259]);... (3 Replies)
Discussion started by: menteith
3 Replies

8. Shell Programming and Scripting

Renaming file in batch

Hi guys, I need a script to change the file names e.g.:- below are the mentioned files, i want t0 change the last character of the name 00000.cdr with e.g bep01.smsc.191214210500-00000.cdr to bep01.smsc.191214210500-92311.cdr next file be like bep01.smsc.191214210500-92312.cdr # ls -ltr... (9 Replies)
Discussion started by: mfaizan40
9 Replies

9. Shell Programming and Scripting

Perl error in batch command but works one at a time

In the below perl executes if one file is processed perfect. However, when multiple files are processed in batch which is preferred I get the below error that I can not seem to fix it as the '' necessary for the command to execute, but seem to only work for one -arg option. Thank you :). ... (2 Replies)
Discussion started by: cmccabe
2 Replies
PMDABASH(1)						      General Commands Manual						       PMDABASH(1)

NAME
pmdabash - Bourne-Again SHell trace performance metrics domain agent SYNOPSIS
$PCP_PMDAS_DIR/bash/pmdabash [-C] [-d domain] [-l logfile] [-I interval] [-t timeout] [-U username] configfile DESCRIPTION
pmdabash is an experimental Performance Metrics Domain Agent (PMDA) which exports "xtrace" events from a traced bash(1) process. This includes the command execution information that would usually be sent to standard error with the set -x option to the shell. Event metrics are exported showing each command executed, the function name and line number in the script, and a timestamp. Additionally, the process identifier for the shell and its parent process are exported. This requires bash version 4 or later. A brief description of the pmdabash command line options follows: -d It is absolutely crucial that the performance metrics domain number specified here is unique and consistent. That is, domain should be different for every PMDA on the one host, and the same domain number should be used for the same PMDA on all hosts. -l Location of the log file. By default, a log file named bash.log is written in the current directory of pmcd(1) when pmdabash is started, i.e. $PCP_LOG_DIR/pmcd. If the log file cannot be created or is not writable, output is written to the standard error instead. -s Amount of time (in seconds) between subsequent evaluations of the shell trace file descriptor(s). The default is 2 seconds. -m Maximum amount of memory to be allowed for each event queue (one per traced process). The default is 2 megabytes. -U User account under which to run the agent. The default is the unprivileged "pcp" account in current versions of PCP, but in older versions the superuser account ("root") was used by default. INSTALLATION
In order for a host to export the names, help text and values for the bash performance metrics, do the following as root: # cd $PCP_PMDAS_DIR/bash # ./Install As soon as an instrumented shell script (see INSTRUMENTATION selection below) is run, with tracing enabled, new metric values will appear - no further setup of the agent is required. If you want to undo the installation, do the following as root: # cd $PCP_PMDAS_DIR/bash # ./Remove pmdabash is launched by pmcd(1) and should never be executed directly. The Install and Remove scripts notify pmcd(1) when the agent is installed or removed. INSTRUMENTATION
In order to allow the flow of event data between a bash(1) script and pmdabash, the script should take the following actions: #!/bin/sh source $PCP_DIR/etc/pcp.sh pcp_trace on $@ # enable tracing echo "awoke, $count" pcp_trace off # disable tracing The tracing can be enabled and disabled any number of times by the script. On successful installation of the agent, several metrics will be available: $ pminfo bash bash.xtrace.numclients bash.xtrace.maxmem bash.xtrace.queuemem bash.xtrace.count bash.xtrace.records bash.xtrace.parameters.pid bash.xtrace.parameters.parent bash.xtrace.parameters.lineno bash.xtrace.parameters.function bash.xtrace.parameters.command When an instrumented script is running, the generation of event records can be verified using the pmevent(1) command, as follows: $ pmevent -t 1 -x '' bash.xtrace.records host: localhost samples: all bash.xtrace.records["4538 ./test-trace.sh 1 2 3"]: 5 event records 10:00:05.000 --- event record [0] flags 0x19 (point,id,parent) --- bash.xtrace.parameters.pid 4538 bash.xtrace.parameters.parent 4432 bash.xtrace.parameters.lineno 43 bash.xtrace.parameters.command "true" 10:00:05.000 --- event record [1] flags 0x19 (point,id,parent) --- bash.xtrace.parameters.pid 4538 bash.xtrace.parameters.parent 4432 bash.xtrace.parameters.lineno 45 bash.xtrace.parameters.command "(( count++ ))" 10:00:05.000 --- event record [2] flags 0x19 (point,id,parent) --- bash.xtrace.parameters.pid 4538 bash.xtrace.parameters.parent 4432 bash.xtrace.parameters.lineno 46 bash.xtrace.parameters.command "echo 'awoke, 3'" 10:00:05.000 --- event record [3] flags 0x19 (point,id,parent) --- bash.xtrace.parameters.pid 4538 bash.xtrace.parameters.parent 4432 bash.xtrace.parameters.lineno 47 bash.xtrace.parameters.command "tired 2" 10:00:05.000 --- event record [4] flags 0x19 (point,id,parent) --- bash.xtrace.parameters.pid 4538 bash.xtrace.parameters.parent 4432 bash.xtrace.parameters.lineno 38 bash.xtrace.parameters.function "tired" bash.xtrace.parameters.command "sleep 2" FILES
$PCP_PMCDCONF_PATH command line options used to launch pmdabash $PCP_PMDAS_DIR/bash/help default help text file for the bash metrics $PCP_PMDAS_DIR/bash/Install installation script for the pmdabash agent $PCP_PMDAS_DIR/bash/Remove undo installation script for pmdabash $PCP_LOG_DIR/pmcd/bash.log default log file for error messages and other information from pmdabash PCP ENVIRONMENT
Environment variables with the prefix PCP_ are used to parameterize the file and directory names used by PCP. On each installation, the file /etc/pcp.conf contains the local values for these variables. The $PCP_CONF variable may be used to specify an alternative configura- tion file, as described in pcp.conf(5). SEE ALSO
bash(1), pmevent(1) and pmcd(1). Performance Co-Pilot PCP PMDABASH(1)
All times are GMT -4. The time now is 06:11 PM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy