Sponsored Content
Full Discussion: Match and copy
Top Forums Shell Programming and Scripting Match and copy Post 302925327 by RudiC on Sunday 16th of November 2014 07:29:05 AM
Old 11-16-2014
Quote:
Originally Posted by cmccabe
. . . Is this possible? Thank you Smilie.
Almost certainly - provided you get your act together.

Four file names (LCH_exons.txt, refseq_genes.txt, refseq_exons, and LCH_exons) are supplied of which only one matches one in your attached samples, of which, as derekludwig points out, none meets the structure of your second file.

Would you like to receive a proposal of the same quality as the request?
 

10 More Discussions You Might Find Interesting

1. Shell Programming and Scripting

Match a pattern and copy above two lines

Dear experts, i want to search pattern tre and copy this line and above two lines in a seperate file:: Thanks for the help SEV="MAJOR": RX-TX HW-FAILURE DOMAIN="alcomc2_BSS_20 unit-type % bts nbr % 24 SBL-type % tre nbr % 4 subnb % 255 BR, Danish (16 Replies)
Discussion started by: Danish Shakil
16 Replies

2. UNIX for Advanced & Expert Users

Match the string and copy records to another location

Hi, I have particular set of files which have the below contents: ****** PBX TYPE:ID6 PBX-id: A11 rolled on 123456 368763 00 >>>>>> A11,2008-07-01 21:31:00.000,42,42112, ,XXXXXXXX A11,2008-07-01 21:40:00.000,6, , ,XXXXXXX A12,2008-07-01 21:53:00.000,68, , ,XXXXXXXX... (12 Replies)
Discussion started by: bsandeep_80
12 Replies

3. Shell Programming and Scripting

Match File and Copy File Script (Homework, Closed)

Can you please help on this? I am looking for the shell script which does following:- step 1: It should open the file /u/manish/input/FileIndex.dat and read line by line step 2: Once first line is read (for ex: File1), we have to find a file, that contains this matching... (4 Replies)
Discussion started by: teteguru1
4 Replies

4. UNIX for Dummies Questions & Answers

Two files; if cells match then copy over other columns

My current issue is dealing with two space delimited files. The first file has column 1 as the sample ID's, then columns 2 - n as the observations. The second file has column 1 as the sample ID's, column 2 as the mother ID's, column 3 as the father ID's, column 4 as the gender, and column 5... (3 Replies)
Discussion started by: Renyulb28
3 Replies

5. Shell Programming and Scripting

Need Help - match file name and copy to Directory

I am trying to sort the following files from folder Bag to Apple, Cat Food, Dog Food. I can get all of the files I want into a new folder, but not sure of the best approch to get them to their final directory My Files ========== apple.1234.ext apple.1235.ext cat food 101.ext Cat Food... (2 Replies)
Discussion started by: mtschroeder
2 Replies

6. Shell Programming and Scripting

Match pattern1 in file, match pattern2, substitute value1 in line

not getting anywhere with this an xml file contains multiple clients set up with same tags, different values. I need to parse the file for client foo, and change the value of tag "64bit" from false to true. cat clients.xml <Client type"FIX"> <ClientName>foo</ClientName>... (3 Replies)
Discussion started by: jack.bauer
3 Replies

7. Shell Programming and Scripting

Match text in a range and copy value

In the files attached, I am trying to: if Files.txt $1 is in the range of Exons.txt $1, then in Files.txt $4 the value from Exons.txt $3 is copied else if no match is found Exons.txt $3 = "Intron" For example, the first value in File.txt $1 is chr1:14895-14944 and is not found in any range... (4 Replies)
Discussion started by: cmccabe
4 Replies

8. Shell Programming and Scripting

Match and copy by text

In the attached .txt file, I am trying to match $5 with $1 and copy $4 to $7. That file was created using: awk 'BEGIN {OFS="\t"} {sub("chr","",$1)} {print $5,$2,$3,$1,$4,$7} {print $6,$3,$2,$1}' matrix_pxlence.txt > output.txt but I can not seem to add this last bit to the command. ... (1 Reply)
Discussion started by: cmccabe
1 Replies

9. Shell Programming and Scripting

awk to print match or non-match and select fields/patterns for non-matches

In the awk below I am trying to output those lines that Match between file1 and file2, those Missing in file1, and those missing in file2. Using each $1,$2,$4,$5 value as a key to match on, that is if those 4 fields are found in both files the match, but if those 4 fields are not found then missing... (0 Replies)
Discussion started by: cmccabe
0 Replies

10. UNIX for Beginners Questions & Answers

Data match 2 files based on first 2 columns matching only and join if match

Hi, i have 2 files , the data i need to match is in masterfile and i need to pull out column 3 from master if column 1 and 2 match and output entire row to new file I have tried with join and awk and i keep getting blank outputs or same file is there an easier way than what i am... (4 Replies)
Discussion started by: axis88
4 Replies
syscallbysysc.d(1m)						   USER COMMANDS					       syscallbysysc.d(1m)

NAME
syscallbysysc.d - syscalls by syscall. Uses DTrace. SYNOPSIS
syscallbysysc.d DESCRIPTION
syscallbysysc.d is a DTrace OneLiner to a report of the number of each type of system call made. This is useful to identify which system call is the most common. Docs/oneliners.txt and Docs/Examples/oneliners_examples.txt in the DTraceToolkit contain this as a oneliner that can be cut-n-paste to run. Since this uses DTrace, only users with root privileges can run this command. EXAMPLES
This samples until Ctrl-C is hit. # syscallbysysc.d FIELDS
first field This is the system call type. Most have man pages in section 2. second field This is the count, the number of occurrances for this system call. DOCUMENTATION
See the DTraceToolkit for further documentation under the Docs directory. The DTraceToolkit docs may include full worked examples with ver- bose descriptions explaining the output. EXIT
syscallbysysc.d will sample until Ctrl-C is hit. AUTHOR
Brendan Gregg [Sydney, Australia] SEE ALSO
procsystime(1M), dtrace(1M), truss(1) version 1.00 May 15, 2005 syscallbysysc.d(1m)
All times are GMT -4. The time now is 05:04 AM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy