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Top Forums UNIX for Dummies Questions & Answers Select distinct sequences from fasta file and list Post 302918662 by jim mcnamara on Wednesday 24th of September 2014 04:04:55 PM
Old 09-24-2014
Code:
#  Try awk (or nawk on Solaris)
awk ' />/ {arr[$0]=""; i=$0; next}
        {arr[i]=arr[i] $0}
        END {for( p in arr) { if ( index(arr[p], "FCDIR")>0 ) {print p, arr[p] }}}
       '   fasta_file > newfile

 

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CURRENT(3)								 1								CURRENT(3)

current - Return the current element in an array

SYNOPSIS
mixed current (array &$array) DESCRIPTION
Every array has an internal pointer to its "current" element, which is initialized to the first element inserted into the array. PARAMETERS
o $array - The array. RETURN VALUES
The current(3) function simply returns the value of the array element that's currently being pointed to by the internal pointer. It does not move the pointer in any way. If the internal pointer points beyond the end of the elements list or the array is empty, current(3) returns FALSE. Warning This function may return Boolean FALSE, but may also return a non-Boolean value which evaluates to FALSE. Please read the section on Booleans for more information. Use the === operator for testing the return value of this function. EXAMPLES
Example #1 Example use of current(3) and friends <?php $transport = array('foot', 'bike', 'car', 'plane'); $mode = current($transport); // $mode = 'foot'; $mode = next($transport); // $mode = 'bike'; $mode = current($transport); // $mode = 'bike'; $mode = prev($transport); // $mode = 'foot'; $mode = end($transport); // $mode = 'plane'; $mode = current($transport); // $mode = 'plane'; $arr = array(); var_dump(current($arr)); // bool(false) $arr = array(array()); var_dump(current($arr)); // array(0) { } ?> NOTES
Note You won't be able to distinguish the end of an array from a boolean FALSE element. To properly traverse an array which may contain FALSE elements, see the each(3) function. SEE ALSO
end(3), key(3), each(3), prev(3), reset(3), next(3). PHP Documentation Group CURRENT(3)
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