Id 508680
TestName Whole Exome Sequencing
Offerer Baylor Medical Genetics Laboratories Baylor College of Medicine
DirectorList Sarah Elsea, PhD, ABMG, FACMG, Diplomate of the American Board of Medical Genetics, Lab Director DirectorList Christine Eng, MD, ABMG, FACMG, Diplomate of the American Board of Medical Genetics, Medical Director, Laboratory Director DirectorList Marilyn Li, MD, ABMG, Diplomate of the American Board of Medical Genetics, Lab Director DirectorList Ankita Patel, PhD, ABMG, Diplomate of the American Board of Medical Genetics, Lab Director DirectorList Lee-Jun Wong, PhD, ABMG, Diplomate of the American Board of Medical Genetics, Lab Director
Hi,
I'm looking for an "easy" way to parse a xml file to a proper structure.
The xml looks like this
What shall I use? Does anybody has some example-code to share or some good links/book-references?
thx for any reply
-fe (5 Replies)
I need to know the way. I have got parsing down some nodes. But I was unable to get the child node perfectly. If you have code please send it. It will be very useful for me. (0 Replies)
Hi,
I need to parse the following XML data enclosed in <a> </a> XML tag using shell script.
<X>
.....
</X>
<a>
<b>
<c>data1</c>
<c>data2</c>
</b>
<d>
<c>data3</c>
</d>
</a>
<XX>
...
</XX> (5 Replies)
I have an task definition listing xml file that contains a list of tasks such as
<TASKLIST
<TASK definition="Completion date" id="Taskname1" Some other
<CODE name="Code12"
<Parameter pname="Dog" input="5.6" units="feet" etc /Parameter>
<Parameter... (3 Replies)
Hi all!
I'm looking to write a quick script and in it I need to request an XML file from a service running on localhost and parse that XML file and output it. I'm looking to do it in bash although it doesn't really matter what shell it is in. The XML file returned would look like this:
... (3 Replies)
Hello all, I have been asked to exercise my shell scripting and it has been 10 plus years since I used to do it so I can not remember hardly anything and ask for your help.
What I need to do is copy a line out of a file that can be 10 to 100 characters long, I then need to parse this line into... (3 Replies)
Hi
I am having an xml file with lines like these
<d name="T2tt_350_100" title="T2tt_012j_350_100_428p4_pPF_PU" add="1" color="4" ls="1" lw="2" normf="1" xsection="0.070152" EqLumi="94651.6"... (2 Replies)
Hi All,
I want to parse XML to extract values of the tags to do further processing. The XML looks like
<?xml version="1.0" encoding="ISO-8859-1"?>
<allinput>
<input A="2389906" B="install">
<C>111</C>
<D>222</D>
<E>333</E>
<F></F>
<G>444</G>
<H></H>
<I></I>
<J></J>
<K>C,D,E,G</K>... (6 Replies)
Hi ,
I have a XML file like below
file name : sample.xml
<?xml version="1.0"?>
<catalog>
<author>Rajini</author>
<title>XML Guide</title>
<Text> </Text>
<genre>Computer</genre>
<price>44.95</price>
</catalog>
<?xml version="1.0"?>
<catalog>
... (5 Replies)
Discussion started by: karthinvk
5 Replies
LEARN ABOUT DEBIAN
bup-margin
bup-margin(1) General Commands Manual bup-margin(1)NAME
bup-margin - figure out your deduplication safety margin
SYNOPSIS
bup margin [options...]
DESCRIPTION
bup margin iterates through all objects in your bup repository, calculating the largest number of prefix bits shared between any two
entries. This number, n, identifies the longest subset of SHA-1 you could use and still encounter a collision between your object ids.
For example, one system that was tested had a collection of 11 million objects (70 GB), and bup margin returned 45. That means a 46-bit
hash would be sufficient to avoid all collisions among that set of objects; each object in that repository could be uniquely identified by
its first 46 bits.
The number of bits needed seems to increase by about 1 or 2 for every doubling of the number of objects. Since SHA-1 hashes have 160 bits,
that leaves 115 bits of margin. Of course, because SHA-1 hashes are essentially random, it's theoretically possible to use many more bits
with far fewer objects.
If you're paranoid about the possibility of SHA-1 collisions, you can monitor your repository by running bup margin occasionally to see if
you're getting dangerously close to 160 bits.
OPTIONS --predict
Guess the offset into each index file where a particular object will appear, and report the maximum deviation of the correct answer
from the guess. This is potentially useful for tuning an interpolation search algorithm.
--ignore-midx
don't use .midx files, use only .idx files. This is only really useful when used with --predict.
EXAMPLE
$ bup margin
Reading indexes: 100.00% (1612581/1612581), done.
40
40 matching prefix bits
1.94 bits per doubling
120 bits (61.86 doublings) remaining
4.19338e+18 times larger is possible
Everyone on earth could have 625878182 data sets
like yours, all in one repository, and we would
expect 1 object collision.
$ bup margin --predict
PackIdxList: using 1 index.
Reading indexes: 100.00% (1612581/1612581), done.
915 of 1612581 (0.057%)
SEE ALSO bup-midx(1), bup-save(1)BUP
Part of the bup(1) suite.
AUTHORS
Avery Pennarun <apenwarr@gmail.com>.
Bup unknown-bup-margin(1)