Hey guy,
how to make bash script to create foo.txt file and add current date into file content and that file always append.
example: today the script run and add today date into content foo.txt
and tomorrow the script will run and add tomorrow date in content foo.txt without remove today... (3 Replies)
There are some files in a directory like a.tx~ , b.txt~,c.txt~.
I want to delete all these files inside that directory and sub directory.
How can i do this?
#!/bin/bash
cd thatdirectory
......
rm -rf *~
...... (7 Replies)
i have a txt file of image names that have to be deleted in pwd how can i use the txt file to delete the files in pwd and is it possible?--i might be able to import the txt files into a spreadsheet ahd same it as a csv file. i want it to be done recursive lly --what i mean is teh sysem goes thru... (4 Replies)
I have multiple txt files which begin with the word "orders" in folder C:\source. I need to move the files to folder C:\dest and rename them to "process_<date>_<count>"
So for example , if there are 3 files ordersa.txt , ordersb.txt and ordersc.txt in C:\source , after running the script I want... (1 Reply)
I have multiple txt files which begin with the word "orders" in folder C:\source. I need to move the files to folder C:\dest and rename them to "process_<date>_<count>"
So for example , if there are 3 files ordersa.txt , ordersb.txt and ordersc.txt in C:\source , after running the script I want... (7 Replies)
Hi guys,
brand new to this thread and very very new to UNIX...so go easy please!
Anyway I have a file that looks like this:
>>--------------------------------------------------------------------------
Date/Time/Eng. : 2012-06-22 / 00:26 / DS
Reported problem : (SD) ... (5 Replies)
Hi,
I`m a total newbie, well my requirement is that i have 2 files
I want to identify which countries i do not currently have in db..
how can i use the grep or another command to find this file ..
i want to match all-countries.txt with countries-in-db.txt so the output is equal to... (11 Replies)
hi,
I need a help. I used this command to list all the log files which are for more than 10 days to a text file.
find /usr/script_test -type f -mtime +10>>/usr/ftprm.txt
I want all these files listed in the ftprm.txt to be ftp in another machine and then rm the files.
Anyone can help me... (8 Replies)
Hi all,
I desperately need a small script which deletes everything in a particular .txt file when "Abs = {" appears till "},", and also when "B-1 = {" appears till "},"
I would like all the text in between of those instances to be deleted, however, other text to be unedited (kept as it is).... (12 Replies)
Hi, I have very old files in my server like from 2012 and i want to delete them,
Please help.
Thanks in advance.. (2 Replies)
Discussion started by: nanz143
2 Replies
LEARN ABOUT DEBIAN
re-pcr
RE-PCR(1) General Commands Manual RE-PCR(1)NAME
re-PCR -- Find sequence tagged sites (STS) in DNA sequences
SYNOPSIS
re-PCR [-hV] -p hash-file [-g gaps] [-n mism] [-lq] [primer ...]
re-PCR [-hV] -P hash-file [-g gaps] [-n mism] [-l] [-m margin] [-O+|-] [-C batchcnt] [-o outfile] [-r+|-] [primers-file ...]
re-PCR [-hV] -s hash-file [-g gaps] [-n mism] [-lq] [-m margin] [-o outfile] [-r+|-] [left right lo[-hi] [...]]
re-PCR [-hV] -S hash-file [-g gaps] [-n mism] [-lq] [-m margin] [-O+|-] [-C batchcnt] [-o outfile] [-r+|-] [stsfile ...]
DESCRIPTION
Implements reverse searching (called Reverse e-PCR) to make it feasible to search the human genome sequence and other large genomes by per-
forming STS and primer searches.
OPTIONS -p=hash-file
Perform primer lookup using hash-file
-P=hash-file
Perform primer lookup using hash-file
-s=hash-file
Perform STS lookup using hash-file
-S=hash-file
Perform STS lookup using hash-file
-n=mism Set max allowed mismatches per primer for lookup
-g=gaps Set max allowed indels per primer for lookup
-m=margin Set variability for STS size for lookup
-l Use presize alignments (only if gaps>0)
-G Print alignments in comments
-d=min-max
Set default STS size
-r=+|- Enable/disable reverse STS lookup
-O=+|- Enable/disable syscall optimisation
-C=batchcnt
Set number of STSes per batch
-o=outfile
Set output file name
-q Quiet (no progress indicator)
EXAMPLE
famap -tN -b genome.famap org/chr_*.fa
fahash -b genome.hash -w 12 -f3 ${PWD}/genome.famap
re-PCR -s genome.hash -n1 -g1 ACTATTGATGATGA AGGTAGATGTTTTT 120-200
See famap(1) and fahash(1)SEE ALSO
/usr/share/doc/ncbi-epcr/README.txt
bioperl(1), e-pcr(1), famap(1) and fahash(1)AUTHORS
This manual page was written by Andreas Tille <tille@debian.org> for the Debian system (but may be used by others). Permission is granted
to copy, distribute and/or modify this document under the terms of the GNU General Public License, Version 2 any later version published by
the Free Software Foundation.
On Debian systems, the complete text of the GNU General Public License can be found in /usr/share/common-licenses/GPL.
April 2008 RE-PCR(1)