fahash(1) [debian man page]

FAHASH(1)							   User Commands							 FAHASH(1)

NAME

       fahash - sequence hash builder for reverse e-PCR

SYNOPSIS

       fahash [-hV] -b hash-file [-w wdsize] [-f period] [-F fragment_min,fragment_max] [-k] [-c cachesize] [-v 1|2] famap-file ...

       fahash [-hV] -T hash-file [-o outfile]

DESCRIPTION

       The program fahash is part of the e-PCR suite and is used to build hash-files, and output word usage statistics for reverse e-PCR searches.

OPTIONS

       -b hash-file
	      Build hash tables (hash-file) from sequence files,

       -T hash-file
	      Print word usage statistics for hash-file

       -o outfile
	      Write output to file `outfile'

   build-options:
       -w wordsize
	      Set word size when building hash tables

       -f period
	      Set discontiguity when building hash tables

       -k     Skip repeats when building hash-file

       -F min,max
	      Set watermarks for fragment size (in Mb) (version 1 only)

       -c cachesize
	      Set cache size (version 2 only)

       -v ver Use format version (1|2, 2 is default)

EXAMPLE

	famap -tN -b genome.famap org/chr_*.fa

	fahash -b genome.hash -w 12 -f3 ${PWD}/genome.famap

	re-PCR -s genome.hash -n1 -g1 ACTATTGATGATGA AGGTAGATGTTTTT 120-200

       See famap(1) and re-pcr(1)

SEE ALSO

       /usr/share/doc/ncbi-epcr/README.txt

       bioperl(1), e-pcr(1), famap(1) and re-pcr(1)

AUTHORS

       This  manual page was written by Andreas Tille <tille@debian.org> for the Debian system (but may be used by others).  Permission is granted
       to copy, distribute and/or modify this document under the terms of the GNU General Public License, Version 2 any later version published by
       the Free Software Foundation.

       On Debian systems, the complete text of the GNU General Public License can be found in /usr/share/common-licenses/GPL.

Reverse e-PCR: sequence hash builder version 2.3.9		    April 2008								 FAHASH(1)

LCP_CRTPOLELT(8)						   User Manuals 						  LCP_CRTPOLELT(8)

NAME

       lcp_crtpolelt - create an Intel(R) TXT policy element of specified type.

SYNOPSIS

       lcp_crtpolelt COMMAND [OPTION]

DESCRIPTION

       lcp_crtpolelt is used to create an Intel(R) TXT policy element of specified type.

OPTIONS

       --create
	      create an policy element

	      --type type	    type of element; must be first option; see below for type strings and their options

	      --out file	    output file name

	      [--ctrl pol-elt-ctr1] PolEltControl field (hex or decimal)

       --show file
	      show policy element

       --verbose
	      enable verbose output; can be specified with any command

       --help print out the help message

   Available type options:
       mle [--minver ver]
	      minimum version of SINIT

       mle [file1][file2]...
	      one or more files containing MLE hash(es); each file can contain multiple hashes

       pconf [file1][file2]...
	      one or more files containing PCR numbers and the desired digest of each; each file will be a PCONF

       custom [--uuid UUID]
	      UUID in format: {0xaabbccdd, 0xeeff, 0xgghh, 0xiijj, {0xkk 0xll, 0xmm, 0xnn, 0xoo, 0xpp}} or "--uuid tboot" to use default

       custom [file]
	      file containing element data

EXAMPLES

   Create an MLE element:
       1   lcp_mlehash -c "logging=serial,vga,memory" /boot/tboot.gz > mle-hash
       2   lcp_crtpolelt --create --type mle --ctrl 0x00 --minver 17 --out mle.elt mle-hash

   Create a PCONF element:
       1   cat /sys/devices/platform/tpm_tis/pcrs | grep -e PCR-00 -e PCR-01 > pcrs
       2   lcp_crtpolelt --create --type pconf --out pconf.elt pcrs

   Create an SBIOS element:
       1   Create hash file containing BIOS hash(es), e.g. named sbios-hash
       2   lcp_crtpolelt --create --type sbios --out sbios.elt sbios-hash

   Create a CUSTOM element:
       1   Create or determine the UUID that will identify this data format (e.g. using uuidgen(1)).
       2   Create the data file that will be placed in this element (e.g. the policy file from tb_polgen(8)).
       3   lcp_crtpolelt --create --type custom --out custom.elt --uuid uuid-value data-file

SEE ALSO

       lcp_crtpol2(8), lcp_mlehash(8), lcp_crtpollist(8), uuidgen(1), tb_polgen(8).

tboot								    2011-12-31							  LCP_CRTPOLELT(8)