Hi all,
I have difficulty to solve the followign problem.
mydata:
StartPoint EndPoint
22 55
2222 2230
33 66
44 58
222 240
11 25
22 60
33 45
The union of above... (2 Replies)
Dear Gurus,
I have 57 tab-delimited different text files, each one containing entries in 3 columns. The first column in each file contains names of objects. Some names are present in more than one file. I would like to find those names and store them in a separate text file, preferably with a... (6 Replies)
Hi, I have a file1 of many long sequences, each preceded by a unique header line. file2 is 3-columns list: headers name, start position, end position. I'd like to extract the sequence region of file1 specified in file2.
Based on a post elsewhere, I found the code:
awk... (2 Replies)
Discussion started by: pathunkathunk
2 Replies
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The forums have been seeing a sharp increase in spam bots, forum robots, and malicious registrations from certain countries. If you have been directed to this thread due to a "No Permission Error" when trying to register please post in this thread and request permission to register, including... (1 Reply)
Hi I have 2 files; usually the end position in the file1 is the start position in the file2 and the end position in file2 will be the start position in file1 (flanks)
file1
Id start end
aaa1 0 3000070
aaa1 3095270 3095341
aaa1 3100822 3100894
aaa1 ... (1 Reply)
Hello, here I am posting my query again with modified data input files.
see my query is :
i have two input files file1 and file2.
file1 is smalldata.fasta
>gi|546671471|gb|AWWX01449637.1| Bubalus bubalis breed Mediterranean WGS:AWWX01:contig449636, whole genome shotgun sequence... (20 Replies)
Hi,
I have been trying to retrieve the names of files present in a directory one by one but the names of files are getting overlapped on one another.
I tried the below command.
ls -1 > filename
please help me in getting the file names line by line without overlapping. I am using korn... (6 Replies)
Hi all,
I have a file like this I want to extract only those regions which are big and continous
chr1 3280000 3440000
chr1 3440000 3920000
chr1 3600000 3920000 # region coming within the 3440000 3920000. so i don't want it to be printed in output
chr1 3920000 4800000
chr1 ... (2 Replies)
Discussion started by: amrutha_sastry
2 Replies
LEARN ABOUT DEBIAN
zcmp
ZDIFF(1) General Commands Manual ZDIFF(1)NAME
zcmp, zdiff - compare compressed files
SYNOPSIS
zcmp [ cmp_options ] file1 [ file2 ]
zdiff [ diff_options ] file1 [ file2 ]
DESCRIPTION
Zcmp and zdiff are used to invoke the cmp or the diff program on files compressed via gzip. All options specified are passed directly to
cmp or diff. If only file1 is specified, it is compared to the uncompressed contents of file1.gz. If two files are specified, their con-
tents (uncompressed if necessary) are fed to cmp or diff. The input files are not modified. The exit status from cmp or diff is pre-
served.
SEE ALSO cmp(1), diff(1), zmore(1), zgrep(1), znew(1), zforce(1), gzip(1), gzexe(1)BUGS
Messages from the cmp or diff programs may refer to file names such as "-" instead of to the file names specified.
ZDIFF(1)