Hi,
I need to search for some strings in specific positions in a file.
If the strings: "foo1", "foo2" or "foo3" is on position 266 or position 288 in a file i want the whole line printed.
Any idea how to do it? (5 Replies)
I'm working with a set of files where I'm trying to remove a set of characters from specific fields. The files are comma-delimited, and the characters I want to remove include:
- open parentheses - (
- close parentheses - )
- space followed by a dollar sign - $
I don't want to remove every... (1 Reply)
Been searching for about 3 hours for similar functionality that I can get examples of how to output text from variables into certain locations in a file. I would like to incorporate this into a script. I have not been able to find a command example that does it all in one method. I find part of... (1 Reply)
After spending sometime playing around with my script I just cannot get it to do what I want. So I decided to ask. My file looks something like this:
I am using the following code to extract sequences that contain dashes
awk '/^>/{id=$0;next}{if (match($1,"-")) print id "\n" $0}' infile
... (17 Replies)
Hi
I have a file which is tab-delimited. Now, I'd like to print the lines which have "chr6" string in both first and second columns. Could anybody help? (3 Replies)
Hi,
My file has a numerous sttrings.I want to retain those strings which start with stt and delete entries with >C
For eg:
my infile is
>C4603985... (7 Replies)
This is my problem, I am using the following code to extract the file names with specific strings 0.01:
find ./ -name "*.txt" -exec grep -H '0.01' {} +
It works wonders with a small sample. However, when I use it in a real scenario it produces an empty file -even though I am sure there are... (11 Replies)
Discussion started by: Xterra
11 Replies
LEARN ABOUT PHP
zgrep
ZGREP(1) General Commands Manual ZGREP(1)NAME
zgrep - search possibly compressed files for a regular expression
SYNOPSIS
zgrep [ grep_options ] [ -e ] pattern filename...
DESCRIPTION
Zgrep invokes grep on compressed or gzipped files. These grep options will cause zgrep to terminate with an error code:
(-[drRzZ]|--di*|--exc*|--inc*|--rec*|--nu*). All other options specified are passed directly to grep. If no file is specified, then the
standard input is decompressed if necessary and fed to grep. Otherwise the given files are uncompressed if necessary and fed to grep.
If the GREP environment variable is set, zgrep uses it as the grep program to be invoked.
EXIT CODE
2 - An option that is not supported was specified.
AUTHOR
Charles Levert (charles@comm.polymtl.ca)
SEE ALSO grep(1), gzexe(1), gzip(1), zdiff(1), zforce(1), zmore(1), znew(1)ZGREP(1)