Command to extract all columns except the last few from a txt file
hello,
i have publicly available txt file with little less than 300000 rows. i want to extract from column 1 to column 218 and save it in another text file. i use the cut command but the file is saved with multiple rows from the source file onto a single row in the destination. basically it is not formatted like the source file. the source file is in the below link. i have removed the www since this is my first post and the file name is INP_psf1301.txt
but the resulting file is is not formatted like the original. i want the resulting file to be exactly the same except without the last few columns. i want columns 1 to 218 in the resulting file.
is there a line break or something that i should mention or would AWK command work better?
Hi expersts,
in my directory i have *.txt and *.TXT and *.TXT.log, *.txt.log
I want list only .txt and .TXT files in one command...
how to ??
//purple (1 Reply)
Hi
I have a txt file with 4 columns where I need to add 4 empty columns in the middle meaning that I need what is currently column 4 to be column 8 in a new file.
The idea is that I have to use the file as input in a program that reads the data in column 1 and 8, so the content of the other... (8 Replies)
I have data as follow in the txt file.
I want to skip line starting with '#' sign.
#command program
abc defmt
exp refmt
... ...
I want to store abc exp .... in a array.
I want to store defmt refmt in a array
I need command to read each line in the file.
I need... (6 Replies)
I need to extract information (for example, file owner, directory path, etc). However, the code below does not work? What is wrong?
find /usr/local/www/apache22/data/dev/chown_test -ls
for i in *
do
cut -f 1,2 "$i" | echo
done (3 Replies)
I need to extract all the p-value numbers and the rho numbers from a .txt file and write them as coma separated values in a new file. Ideally I would get two files in the end, one for p- values and one for rho. Any suggestions? I appreciate your help!!!
The .txt file looks essentially like this... (5 Replies)
Hi,
I have a txt file that looks like
log2FoldChange Ontology_term
8.50624450251828 GO:0003700,GO:0003707,GO:0005634,GO:0006355,GO:0043401,GO:0003700,GO:0005634,GO:0006355,GO:0008270,GO:0043565
7.03936870356684 GO:0005515,GO:0008080
6.49606183738682
6.49525073909629 GO:0005515... (4 Replies)
All,
I require a script that grabs some text from the gitHub API and will grep (or other function) for a string a characters that starts with (") quotes followed by two letters, may contain a pipe |, and ending with ) . What i have so far is below but it's not returning anything.
... (4 Replies)
Hello!
I need help :) I have a file like this:
AA BC FG
RF TT GH
DD FF HH
(a few number of rows and three columns) and I want to put the letters of each column in a variable step by step in order to give them as input in another script. So I would like to obtain:
for the 1° loop:... (11 Replies)
Kindly help merging information from two files with the following data structure.
I want to match for the CHR-SNP in Foo and get the columns that match from CHROM-rsID
Fields 1 & 2 of foo may have duplicates, however, a joint key of Fields $1$2$3$4 is unique.
Also would be helpful to clean up... (4 Replies)
Hello,
I'm new to scripting and I need to write a bash script. Here is example of file on which I'm working:
0.3092381 0.3262799 0.3425480 0.3578379 0.3719490
0.3846908 0.3958855 0.4053738 0.4130160 0.4186991
0.4223357 ... (1 Reply)
Discussion started by: jeo_fb
1 Replies
LEARN ABOUT PHP
phar.extractto
PHAR.EXTRACTTO(3) 1 PHAR.EXTRACTTO(3)Phar::extractTo - Extract the contents of a phar archive to a directory
SYNOPSIS
public bool Phar::extractTo (string $pathto, [string|array $files], [bool $overwrite = false])
DESCRIPTION
Note
This method requires the php.ini setting phar.readonly to be set to 0 in order to work for Phar objects. Otherwise, a PharException
will be thrown.
Extract all files within a phar archive to disk. Extracted files and directories preserve permissions as stored in the archive. The
optional parameters allow optional control over which files are extracted, and whether existing files on disk can be overwritten. The sec-
ond parameter files can be either the name of a file or directory to extract, or an array of names of files and directories to extract. By
default, this method will not overwrite existing files, the third parameter can be set to true to enable overwriting of files. This method
is similar to ZipArchive.extractTo(3).
PARAMETERS
o $pathto
- Path within an archive to the file to delete.
o $files
- The name of a file or directory to extract, or an array of files/directories to extract
o $overwrite
- Set to TRUE to enable overwriting existing files
RETURN VALUES
returns TRUE on success, but it is better to check for thrown exception, and assume success if none is thrown.
ERRORS /EXCEPTIONS
Throws PharException if errors occur while flushing changes to disk.
EXAMPLES
Example #1
A Phar.extractTo(3) example
<?php
try {
$phar = new Phar('myphar.phar');
$phar->extractTo('/full/path'); // extract all files
$phar->extractTo('/another/path', 'file.txt'); // extract only file.txt
$phar->extractTo('/this/path',
array('file1.txt', 'file2.txt')); // extract 2 files only
$phar->extractTo('/third/path', null, true); // extract all files, and overwrite
} catch (Exception $e) {
// handle errors
}
?>
SEE ALSO PharData.extractTo(3).
PHP Documentation Group PHAR.EXTRACTTO(3)