Sponsored Content
Top Forums UNIX for Dummies Questions & Answers How to use the the join command to join multiple files by a common column Post 302667105 by Corona688 on Thursday 5th of July 2012 03:49:19 PM
Old 07-05-2012
join file1 file2 file3?
This User Gave Thanks to Corona688 For This Post:
 

10 More Discussions You Might Find Interesting

1. OS X (Apple)

Command line tool to join multiple .wmv files?

I need a simple command line executable that allows me to join many wmv files into one output wmv file, preferrably in a simple way like this: wmvjoin file1.wmv file2.wmv .... > outputfile.wmv So what I want is the wmv-equivalent of mpgtx I cannot find it on internet. Thanks. (2 Replies)
Discussion started by: karman
2 Replies

2. UNIX for Dummies Questions & Answers

Join 2 files with multiple columns: awk/grep/join?

Hello, My apologies if this has been posted elsewhere, I have had a look at several threads but I am still confused how to use these functions. I have two files, each with 5 columns: File A: (tab-delimited) PDB CHAIN Start End Fragment 1avq A 171 176 awyfan 1avq A 172 177 wyfany 1c7k A 2 7... (3 Replies)
Discussion started by: InfoSeeker
3 Replies

3. Shell Programming and Scripting

Join multiple files by column with awk

Hi all, I searched through the forum but i can't manage to find a solution. I need to join a set of files placed in a directory (~1600) by column, and obtain an output with first and second column common to each file, but following columns are taken from the file in the list (precisely the fourth... (10 Replies)
Discussion started by: macsx82
10 Replies

4. Shell Programming and Scripting

Join multiple files based on 1 common column

I have n files (for ex:64 files) with one similar column. Is it possible to combine them all based on that column ? file1 ax100 20 30 40 ax200 22 33 44 file2 ax100 10 20 40 ax200 12 13 44 file2 ax100 0 0 4 ax200 2 3 4 (9 Replies)
Discussion started by: quincyjones
9 Replies

5. Web Development

Perl join two files by "common" column

Hello; I am posting to get any help on my code that I have been struggling for some time. The project is to join two files each with 80k~180k rows. I want to merge them together by the shared common column. The problem of the shared column is partially matching, not exactly the same. File1:... (5 Replies)
Discussion started by: yifangt
5 Replies

6. UNIX for Dummies Questions & Answers

how to join two files using "Join" command with one common field in this problem?

file1: Toronto:12439755:1076359:July 1, 1867:6 Quebec City:7560592:1542056:July 1, 1867:5 Halifax:938134:55284:July 1, 1867:4 Fredericton:751400:72908:July 1, 1867:3 Winnipeg:1170300:647797:July 15, 1870:7 Victoria:4168123:944735:July 20, 1871:10 Charlottetown:137900:5660:July 1, 1873:2... (2 Replies)
Discussion started by: mindfreak
2 Replies

7. UNIX for Dummies Questions & Answers

How to join 2 .txt files based on a common column?

Hi all, I'm trying to join two .txt file tab delimitated based on a common column. File 1 transcript_id gene_id length effective_length expected_count TPM FPKM IsoPct comp1000201_c0_seq1 comp1000201_c0 337 183.51 0.00 0.00 0.00 0.00 comp1000297_c0_seq1 ... (1 Reply)
Discussion started by: alisrpp
1 Replies

8. Shell Programming and Scripting

Join common patterns in multiple lines into one line

Hi I have a file like 1 2 1 2 3 1 5 6 11 12 10 2 7 5 17 12 I would like to have an output as 1 2 3 5 6 10 7 11 12 17 any help would be highly appreciated Thanks (4 Replies)
Discussion started by: Harrisham
4 Replies

9. Shell Programming and Scripting

Join 2nd column of multiple files

Dear All, I have many files formatted like this: file1.txt: 1/2-SBSRNA4 18 A1BG 3 A1BG-AS1 6 A1CF 0 A2LD1 1 A2M 1160 file2.txt 1/2-SBSRNA4 53 A1BG 1 A1BG-AS1 7 A1CF 0 A2LD1 3 A2M 2780 (5 Replies)
Discussion started by: paolo.kunder
5 Replies

10. Shell Programming and Scripting

Join columns across multiple lines in a Text based on common column using BASH

Hello, I have a file with 2 columns ( tableName , ColumnName) delimited by a Pipe like below . File is sorted by ColumnName. Table1|Column1 Table2|Column1 Table5|Column1 Table3|Column2 Table2|Column2 Table4|Column3 Table2|Column3 Table2|Column4 Table5|Column4 Table2|Column5 From... (6 Replies)
Discussion started by: nv186000
6 Replies
comm(1) 							   User Commands							   comm(1)

NAME
comm - select or reject lines common to two files SYNOPSIS
comm [-123] file1 file2 DESCRIPTION
The comm utility reads file1 and file2, which must be ordered in the current collating sequence, and produces three text columns as output: lines only in file1; lines only in file2; and lines in both files. If the input files were ordered according to the collating sequence of the current locale, the lines written will be in the collating sequence of the original lines. If not, the results are unspecified. OPTIONS
The following options are supported: -1 Suppresses the output column of lines unique to file1. -2 Suppresses the output column of lines unique to file2. -3 Suppresses the output column of lines duplicated in file1 and file2. OPERANDS
The following operands are supported: file1 A path name of the first file to be compared. If file1 is -, the standard input is used. file2 A path name of the second file to be compared. If file2 is -, the standard input is used. USAGE
See largefile(5) for the description of the behavior of comm when encountering files greater than or equal to 2 Gbyte ( 2**31 bytes). EXAMPLES
Example 1: Printing a list of utilities specified by files If file1, file2, and file3 each contain a sorted list of utilities, the command example% comm -23 file1 file2 | comm -23 - file3 prints a list of utilities in file1 not specified by either of the other files. The entry: example% comm -12 file1 file2 | comm -12 - file3 prints a list of utilities specified by all three files. And the entry: example% comm -12 file2 file3 | comm -23 -file1 prints a list of utilities specified by both file2 and file3, but not specified in file1. ENVIRONMENT VARIABLES
See environ(5) for descriptions of the following environment variables that affect the execution of comm: LANG, LC_ALL, LC_COLLATE, LC_CTYPE, LC_MESSAGES, and NLSPATH. EXIT STATUS
The following exit values are returned: 0 All input files were successfully output as specified. >0 An error occurred. ATTRIBUTES
See attributes(5) for descriptions of the following attributes: +-----------------------------+-----------------------------+ | ATTRIBUTE TYPE | ATTRIBUTE VALUE | +-----------------------------+-----------------------------+ |Availability |SUNWesu | +-----------------------------+-----------------------------+ |CSI |enabled | +-----------------------------+-----------------------------+ |Interface Stability |Standard | +-----------------------------+-----------------------------+ SEE ALSO
cmp(1), diff(1), sort(1), uniq(1), attributes(5), environ(5), largefile(5), standards(5) SunOS 5.10 3 Mar 2004 comm(1)
All times are GMT -4. The time now is 03:49 PM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy