Hi, I have the following files,
A M 2 3
B E 4 5
C I 5 6
D O 4 5
A M 3 4
B E 5 2
F U 7 9
J K 2 3
OUTPUT
A M 2 3 3 4
B E 4 5 5 2
thanks in advance, (7 Replies)
input:
ref.1;rack.1;1 #group1
ref.1;rack.1;2 #group1
ref.1;rack.2;1 #group2
ref.2;rack.3;1 #group3
ref.2;rack.3;2 #group3
ref.2;rack.3;3 #group3
Among records from same group (i.e. with same 1st and 2nd field - separated by ";"), I would need to keep the last record... (5 Replies)
Dear all,
I have small script which seems to be working but seems to have some bug.
It suppose to read commonTxt and then print the noOfLines in outputFile.
It is working for most of the txt but unable to add some of the variables values.
Can somebody please spend looking at the thread and... (3 Replies)
Hi all !
I almost did it but got a small problem.
input:
cars red
cars blue
cars green
truck black
Wanted:
cars red-blue-green
truck black
Attempt:
gawk 'BEGIN{FS="\t"}{a = a (a?"-":"")$2; $2=a; print $1 FS $2}' input
But I also got the intermediate records... (2 Replies)
Good morning all,
I have a problem that is one step beyond a standard awk compare.
I would like to compare three files which have several thousand records against a fourth file. All of them have a value in each row that is identical, and one value in each of those rows which may be duplicated... (1 Reply)
I have two files:
File_1:
@M04961:22:000000000-B5VGJ:1:1101:9280:7106 1:N:0:86
GGCATGAAAACATACAAACCGTCTTTCCAGAAATTGTTCCAAGTATCGGCAACAGCTTTATCAATACCATGAAAAATATCAACCACACCAGAAGCAGCAT
+
GGGGGGGGGGGGGGGGGCCGGGGGF,EDFFGEDFG,@DGGCGGEGGG7DCGGGF68CGFFFGGGG@CGDGFFDFEFEFF:30CGAFFDFEFF8CAF;;8F
... (3 Replies)
Hello there:
I want to find common among files. They all have one column.
Format for data:
CEU_snp_CHR21.txt
21:10758305
21:10827533
21:10913441
21:10920098
21:10952160
21:10966322
21:10985991
NAT_CHR21_variants.txt
21:10971951 (3 Replies)
Discussion started by: genome
3 Replies
LEARN ABOUT OPENSOLARIS
comm
comm(1) User Commands comm(1)NAME
comm - select or reject lines common to two files
SYNOPSIS
comm [-123] file1 file2
DESCRIPTION
The comm utility reads file1 and file2, which must be ordered in the current collating sequence, and produces three text columns as output:
lines only in file1; lines only in file2; and lines in both files.
If the input files were ordered according to the collating sequence of the current locale, the lines written will be in the collating
sequence of the original lines. If not, the results are unspecified.
OPTIONS
The following options are supported:
-1 Suppresses the output column of lines unique to file1.
-2 Suppresses the output column of lines unique to file2.
-3 Suppresses the output column of lines duplicated in file1 and file2.
OPERANDS
The following operands are supported:
file1 A path name of the first file to be compared. If file1 is -, the standard input is used.
file2 A path name of the second file to be compared. If file2 is -, the standard input is used.
USAGE
See largefile(5) for the description of the behavior of comm when encountering files greater than or equal to 2 Gbyte ( 2^31 bytes).
EXAMPLES
Example 1 Printing a list of utilities specified by files
If file1, file2, and file3 each contain a sorted list of utilities, the command
example% comm -23 file1 file2 | comm -23 - file3
prints a list of utilities in file1 not specified by either of the other files. The entry:
example% comm -12 file1 file2 | comm -12 - file3
prints a list of utilities specified by all three files. And the entry:
example% comm -12 file2 file3 | comm -23 -file1
prints a list of utilities specified by both file2 and file3, but not specified in file1.
ENVIRONMENT VARIABLES
See environ(5) for descriptions of the following environment variables that affect the execution of comm: LANG, LC_ALL, LC_COLLATE,
LC_CTYPE, LC_MESSAGES, and NLSPATH.
EXIT STATUS
The following exit values are returned:
0 All input files were successfully output as specified.
>0 An error occurred.
ATTRIBUTES
See attributes(5) for descriptions of the following attributes:
+-----------------------------+-----------------------------+
| ATTRIBUTE TYPE | ATTRIBUTE VALUE |
+-----------------------------+-----------------------------+
|Availability |SUNWesu |
+-----------------------------+-----------------------------+
|CSI |enabled |
+-----------------------------+-----------------------------+
|Interface Stability |Standard |
+-----------------------------+-----------------------------+
SEE ALSO cmp(1), diff(1), sort(1), uniq(1), attributes(5), environ(5), largefile(5), standards(5)SunOS 5.11 3 Mar 2004 comm(1)