Hi,
I have thousands of files in a directory that have the following 2 formats:
289620178.aln
289620179.aln
289620180.aln
289620183.aln
289620184.aln
289620185.aln
289620186.aln
289620187.aln
289620188.aln
289620189.aln
289620190.aln
289620192.aln....
and:
alnCDS_1.fasta (1 Reply)
Hi,
I have more than 1 files in the directory. In bash, I can use
cd /work
for x in `ls`
do
:
:
done
to run for each file in the directory.
How about in perl script?
filepath="ABC1"
open(FILE, $filepath) or die "$filepath cannot be opened.";
while(<FILE>) {
: (1 Reply)
Hi!
I want to run a script in parallel with different arguments.
eg.
start
script.sh argA script.sh argB script.sh argC
end
Can someone please tell how to achieve this.
Thanks in advance. (4 Replies)
Hi,
I want to run a Perl script on multiple files, with same name ("Data.txt") but in different directories (eg : 2010_06_09_A/Data.txt, 2010_06_09_B/Data.txt).
I know how to run this perl script on files in the same directory like:
for $i in *.txt
do
perl myscript.pl $i > $i.new... (8 Replies)
Hi all,
I am trying to create a shell script from solaris 10 server to run a command into multiple specific value in one file. The command is related to Oracle/Sun JES2005Q4 directory server.
#this is the command,
#from path /jes/ds/slapd-rldap1
./ns-inactivate.pl -h mldap1 -p 389 -D... (12 Replies)
Ok hope my vocab is right here, i'm trying to write multiple sets of arguments to another file for example:
I have a script that accepts four arguments and sends them to a another file
$write.sh it then out in
so the file receiver.txt would contain this:
it then out in
what... (2 Replies)
the scenario is -
If I pass 3 three arguments( run time) , it should list all .txt files from a path to temp file
if I pass 2 arguments ( run time) , it should list all .csv files from the same path to another temp file
the above scenario should be handled in single code and also I dont know ... (2 Replies)
Hi
I have 100 files under file A labled 1.txt 2.txt.....100.txt(made up name)
I have 1 files under file B labled name.txt
How can i run the same perl script on 100 files and file name.txt
I want to run
perl script.pl A/1.txt B/name.txt
perl script.pl A/2.txt B/name.txt
.......
perl... (3 Replies)
Linux System having all Perl, Python, PHP (and Ruby) installed
From a Shell script, can call a Perl, Python, PHP (or Ruby ?) file
eg
eg
a Shell script run in a case statement call to run a php file, also Perl or/and Python file???
Like
#!/usr/bin/bash
....
....
case $INPUT_STRING... (1 Reply)
Discussion started by: hoyanet
1 Replies
LEARN ABOUT FREEBSD
atf-sh
ATF-SH(1) BSD General Commands Manual ATF-SH(1)NAME
atf-sh [-s shell] -- interpreter for shell-based test programs
SYNOPSIS
atf-sh script
DESCRIPTION
atf-sh is an interpreter that runs the test program given in script after loading the atf-sh(3) library.
atf-sh is not a real interpreter though: it is just a wrapper around the system-wide shell defined by ATF_SHELL. atf-sh executes the inter-
preter, loads the atf-sh(3) library and then runs the script. You must consider atf-sh to be a POSIX shell by default and thus should not
use any non-standard extensions.
The following options are available:
-s shell Specifies the shell to use instead of the value provided by ATF_SHELL.
ENVIRONMENT
ATF_LIBEXECDIR Overrides the builtin directory where atf-sh is located. Should not be overridden other than for testing purposes.
ATF_PKGDATADIR Overrides the builtin directory where libatf-sh.subr is located. Should not be overridden other than for testing purposes.
ATF_SHELL Path to the system shell to be used in the generated scripts. Scripts must not rely on this variable being set to select a
specific interpreter.
EXAMPLES
Scripts using atf-sh(3) should start with:
#! /usr/bin/env atf-sh
Alternatively, if you want to explicitly choose a shell interpreter, you cannot rely on env(1) to find atf-sh. Instead, you have to hardcode
the path to atf-sh in the script and then use the -s option afterwards as a single parameter:
#! /path/to/bin/atf-sh -s/bin/bash
ENVIRONMENT
ATF_SHELL Path to the system shell to be used in the generated scripts.
SEE ALSO atf-sh(3)BSD September 27, 2014 BSD