05-31-2007
Oh, i am so sorry, I am new to this Forum and don't know all the rules yet. I thought editing the original reply was the thing to do but I guess not. I didn't mean to cause trouble, sorry.
10 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
I have a text file of lines like:
A=5|B=7|G=4|C=3|P=4|...
In other words, each line is a pipe-delimited set of pairs of strings of the form "X=Y".
What I want to do is find the token starting with "C", and print it and its value (so I'd want to print "C=3" in the example above).
I'm... (11 Replies)
Discussion started by: monkeys
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2. Shell Programming and Scripting
I am VERY new to unix scripting. I am having trouble parsing a line into fields for further processing.
I have this script:
#bin/sh
cat ztest2.txt | while read line
do
zvar1=`echo $line | cut -f6`
echo "zvar1 is " $zvar1
done
********************
ztest2.txt looks like:
1 ... (2 Replies)
Discussion started by: rlwilli
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3. Shell Programming and Scripting
Hello,
Im very new to PERL and as a project to work on developing my skills at PERL Im trying to parse poker hands.
Ive tried many methods however I cant get the last step.
$yourfile= 'FILENAME';#poker hands to parse
open (FILE, "$yourfile") or die $!;
@lines = <FILE>;
for (@lines) ... (1 Reply)
Discussion started by: Ek0
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4. Shell Programming and Scripting
I'm trying to make a script that will read variables line by line from a flatfile
i.e.
$ cat testfile
dbfoo sfoo prifoo poofoo bfoo osfoo
dbfoo2 sfoo2 prifoo2 poofoo2 bfoo2 osfoo2
$
The first pass of the script through the flatfile I want:
$1=dbfoo $2=sfoo... (6 Replies)
Discussion started by: loadnabox
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5. Shell Programming and Scripting
Hey guys,
I have this file generated by me... i want to create some HTML output from it.
The problem is that i am really confused about how do I go about reading the file.
The file is in the following format:
TID1 Name1 ATime=xx AResult=yyy AExpected=yyy BTime=xx BResult=yyy... (8 Replies)
Discussion started by: umar.shaikh
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6. UNIX for Dummies Questions & Answers
Hey everyone,
I'm having trouble figuring out how to reformat the following (large) file:
>Cluster 1
0 563nt, >FX2FH6V05GB01A... *
1 405nt, >FX2FH6V05F7LOL... at +/98%
>Cluster 2
0 551nt, >FX2FH6V05FTLO0... at +/98%
1 561nt, >FX2FH6V05F5F1E... *
2 343nt, >FX2FH6V05GBHRK... at +/98%
I... (2 Replies)
Discussion started by: mycoguy
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7. UNIX for Dummies Questions & Answers
So, the beginning of my script will cat & grep a file with the output directed to a new file. The data I have in this file needs to be parsed, read and evaluated.
Basically, I need to identify the latest date/time stamp and then calculate whether or not it is within 15 minutes of the current... (1 Reply)
Discussion started by: hynesward
1 Replies
8. Shell Programming and Scripting
Hi all
I need to put a command line parser together to parse numeric fields and ranges passed to a script. I'm looking for a bash function that is as elegant and simple as possible.
So the input would be of the following form -
1,2,8-12
This would return -
1,2,8,9,10,11,12
Input can... (7 Replies)
Discussion started by: steadyonabix
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9. Shell Programming and Scripting
I have a file1 like
ID E2AK1_HUMAN Reviewed; 630 AA.
CC -!- SUBCELLULAR LOCATION: Host nucleus {ECO:0000305}.
ID E1A_ADEM1 Reviewed; 200 AA.
ID E1A_ADES7 Reviewed; 266 AA.
CC -!- SUBCELLULAR LOCATION: Host nucleus... (8 Replies)
Discussion started by: sammy777
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10. Shell Programming and Scripting
I would like to take a fasta file formated like
>0001
agttcgaggtcagaatt
>0002
agttcgag
>0003
ggtaacctga
and use command line perl to move the all sample gt 8 in length to a new file. the result would be
>0001
agttcgaggtcagaatt
>0003
ggtaacctga
cat ${sample}.fasta | perl -lane... (2 Replies)
Discussion started by: jdilts
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LEARN ABOUT OSX
mailcap.order
MAILCAP.ORDER(5) Order Mailcap Entries MAILCAP.ORDER(5)
NAME
/etc/mailcap.order - the mailcap ordering specifications
DESCRIPTION
The order of entries in the /etc/mailcap file can be altered by editing the /etc/mailcap.order file. Each line of that file specifies a
package and an optional mime type. Mailcap entries that match will be placed in the order of this file. Entries that don't match will be
placed later.
Example
mime-support:*/*
gv:application/postscript
netscape:text/html
less:text/*
emacs:text/*
The above would make any entries provided by the mime-support package (as found in the /usr/lib/mime/packages directory) take priority over
everything else. The gv package will be used over anything else when it comes to postscript documents. Netscape will be used for any html
documents and less will be used for any remaining text documents. However, since neither netscape or less provide for editing documents,
any edit or compose actions will fall through to the emacs rules.
After modifying this file, be sure to run /usr/sbin/update-mime (as root) to propagate the changes into the /etc/mailcap file.
Remember that this files takes package names and not executable names. If you want to define rules that reference specific programs, the
best way is to include them in ~/.mailcap or the user section of the /etc/mailcap file.
LIMITATIONS
There is currently no way to break out a certain type from a wildcard rule. If, for example, both xv and gimp were to specify "image/*"
rules, it isn't possible to use xv for gif images but use gimp for jpeg images.
Also, I would like to add the ability to specify certain actions in the rules. For example, if netscape were to have an edit rule but I
wanted to use emacs for editing/creating html documents, I could place a line like
emacs:text/* action=edit|compose
before the netscape entry. The update-mime program would then spit out entries such that netscape view rule comes before the emacs view
rule but have the netscape edit rule comes after the emacs edit rule.
SEE ALSO
mailcap(5) run-mailcap(1) update-mime(8)
AUTHOR
The mailcap.order specification was written by Brian White <bcwhite@pobox.com>
Debian Project 16th Aug 1998 MAILCAP.ORDER(5)