05-16-2007
Shell Life,
Thanks a lot for your code
10 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
Hi all,
I have a file in the below format....
<A>
B
C
<A>
E
F
<A>
G
H
I need the result file to be:
<A>BC
<A>EF
<A>GH (3 Replies)
Discussion started by: new_ds_man
3 Replies
2. Shell Programming and Scripting
I have a requirement to transpose the below xml which is in a text file on unix:
<?xml version="1.0" ?>
<REQUEST>
<ID>XXX</ID>
<TIMESTAMP>20090720062610</TIMESTAMP>
<FLAG>Y</FLAG>
<TO_FLAG>Y</TO_FLAG>
</REQUEST>
to
<?xml version="1.0"... (13 Replies)
Discussion started by: new_ds_man
13 Replies
3. Shell Programming and Scripting
Hi ALL
I have one input file say FILE1 which looks as below.
a=1
b=2
c=3
a=4
b=5
c=6
.
.
.
Here a,b,c...etc are variable names.
The output file(FILE2) should look like
1,2,3
4,5,6
.....
..... (5 Replies)
Discussion started by: 46019
5 Replies
4. Shell Programming and Scripting
input
IndID ID1 ID2 ID3
a1 a/a b/b c/c
a2 a/a b/b c/c
a3 a/b b/b c/d
a6 a/b b/b c/e
a8 a/a b/c c/e
a9 b/b b/d c/e
output
IDName IndID IDtype C_No
ID1 a1 a/a 1
ID1 a2 a/a 1
ID1 a8 ... (1 Reply)
Discussion started by: stateperl
1 Replies
5. Shell Programming and Scripting
Hello,
Can anyone advise me what command I could use to display the results of the following command
ATOM 1 ca 2 o 3 h 4 h 5 o
dE/dx 0.2057422D-01 0.2463722D-01-0.1068047D-01-0.1495280D-01-0.3725362D-02
dE/dy -0.7179106D-02-0.1554542D-01 0.1016889D-01 0.3268502D-02-0.4888578D-01
dE/dz... (3 Replies)
Discussion started by: wanchem
3 Replies
6. Shell Programming and Scripting
TRANSPOSE
--------------------------------------------------------------------------------
i have a file with recurring fields
Start
A 1
B 2
C 3
D 4
E 5
End
Start
A 11
B 12
C 23
D 25
E 21 (1 Reply)
Discussion started by: aravindj80
1 Replies
7. Shell Programming and Scripting
Dear All
I was wondering how to resolve an issue that I met during my analysis. In particular I have a file like this(tab separated):
factor1 element1 chr1 309343146 330945480 1 protein_coding geneA
factor2 element2 chr2 309350853 309603230 1 protein_coding geneA
factor3 element3 chr3... (2 Replies)
Discussion started by: giuliangiuseppe
2 Replies
8. Shell Programming and Scripting
Hi Friends,
Very urgent requirement
please do needful ASAP..
Input:
|1||1|1||1|3||3|2||2|4||4|2||2|3||3|NA||0|5||5|NA||0|4||4|3||3
output:
|1||1
|1||1
|3||3
|2||2
|4||4
|2||2
|3||3
|NA||0
|5||5 (4 Replies)
Discussion started by: bharat1211
4 Replies
9. UNIX for Dummies Questions & Answers
Have various files like this:
InSlot=0x00000001
InPort=0x00000000
Inref=0x0000002f
InSID=0x00000001
OutSlot=0x00000001
OutPort=0x00000002
Outref=0x00000000
OutSID=0x0000000b
OutUName_2=14
InSlot=0x00000001
InPort=0x00000000
Inref=0x000001a8
InSID=0x00000001
OutSlot=0x00000001... (5 Replies)
Discussion started by: K@rlos
5 Replies
10. UNIX for Beginners Questions & Answers
Hi all,
need a help with getting a one line command to do the following.
i have an input file with rows of data containing credits for each office, the output should be one row for each office with all the credits in rows for that office, if its not there then it should say N/A. the credits are... (10 Replies)
Discussion started by: tech_frk
10 Replies
LEARN ABOUT DEBIAN
revcomp
REVCOMP(1) General Commands Manual REVCOMP(1)
NAME
revcomp - reverse complement a nucleic acid sequence
SYNOPSIS
revcomp [-options] <seqfile>
DESCRIPTION
This manual page documents briefly the revcomp command.
revcomp is a program that generates reverse complement of sequences.
OPTIONS
Available options:
-h Help; print version and usage info.
SEE ALSO
afetch(1), alistat(1), compalign(1), compstruct(1), seqsplit(1), seqstat(1), sfetch(1), shuffle(1), sindex(1), sreformat(1), stranslate(1),
weight(1).
AUTHOR
Sean Eddy
HHMI/Department of Genetics
Washington University School of Medicine
4444 Forest Park Blvd., Box 8510
St Louis, MO 63108 USA
Phone: 1-314-362-7666
FAX : 1-314-362-2157
Email: eddy@genetics.wustl.edu
This manual page was written by Nelson A. de Oliveira <naoliv@gmail.com>,
for the Debian project (but may be used by others).
Mon, 01 Aug 2005 15:28:08 -0300 REVCOMP(1)