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C Programming Quiz
Post 302116536 by luv2beuniq on Saturday 5th of May 2007 03:11:58 AM
05-05-2007
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LEARN ABOUT DEBIAN
bio::graphics::glyph::heat_map_ideogram
Bio::Graphics::Glyph::heat_map_ideogram(3pm) User Contributed Perl Documentation Bio::Graphics::Glyph::heat_map_ideogram(3pm) NAME
Bio::Graphics::Glyph::heat_map_ideogram - The "heat_map_ideogram" glyph SYNOPSIS
See L<Bio::Graphics::Panel> and L<Bio::Graphics::Glyph>. DESCRIPTION
This glyph draws a chromosome ideogram using scored features instead of cytobands. It is a hybrid of the heat_map and ideograms glyphs and accepts options for both. A typical usage would be to pair this glyph with an aggregator that groups scored features such as blast hits or gene_density bins, etc with a centromere. The result is a chromosome ideogram that has bands whose colors vary porportionate to the feature score. OPTIONS See Bio::Graphics::Glyph for a full explanation of standard options. See Bio::Graphics::Glyph::heat_map for an explanation of heat_map options. See Bio::Graphics::Glyph::ideogram for an explanation of ideogram options. BUGS
Please report them. SEE ALSO
Bio::Graphics::Panel, Bio::Graphics::Glyph, Bio::DB::GFF, Bio::SeqI, Bio::SeqFeatureI, Bio::Das, GD AUTHOR
Sheldon McKay <mckays@cshl.edu> Copyright (c) 2006 Cold Spring Harbor Laboratory This library is free software; you can redistribute it and/or modify it under the same terms as Perl itself. See DISCLAIMER.txt for disclaimers of warranty. perl v5.14.2 2012-02-20 Bio::Graphics::Glyph::heat_map_ideogram(3pm)