Please help.
I have a text file which looks something like this
aaa@abc.com, c:FilePath\Eaaa.txt
bbb@abc.com, c:FilePath\Ebbb.txt
ccc@abc.com, c:FilePath\Eccc.txt
ddd@abc.com, c:FilePath\Eddd.txt...so on
I want to write a shell script which will pick up the first field 'aaa@abc.com' and... (12 Replies)
i am attempting to parse a simple text file with multiple lines and four fields in each line, formatted as such:
12/10/2006 12:34:06 77 38
this is what i'm having problems with in my bash script:
sed '1,6d' $RAWDATA > $NEWFILE
#removes first 6 lines from file, which are... (3 Replies)
I have a file name version.properties with the following data:
major.version=14
minor.version=234
I'm trying to write a grep expression to only put "14" to stdout. The following is not working.
grep "major.version=(+)" version.properties
What am I doing wrong? (6 Replies)
Hi guys,
I desperately need some help here...
I need to parse a file similar to this:
I need to read the values for MY_BANNER_SSHD and WARNING_MESSAGE. The value could be empty/single line or multi-line!
# Comments
.
.
.
Some lines
MY_BANNER_SSHD=""... (7 Replies)
I wanted to parse a text file and join in specific format. please suggest me how to get this done..
The output should be in fasta format which consists of lines starting with ID, PT, PA and Sequence. "//" the two slashes are dividing lines between two different sequences.
Like... (10 Replies)
Hello all, I tried searching for something similiar before posting but couldn't come up with anything that fit what I need.
In Linux, I'm trying to parse through a number of files and take the info in them and put it into mysql. My file is a dump from an expect script:
---filename... (3 Replies)
awk -F "" '/<href=>|<href=>|<top>|<top>/ {print $3, OFS=\t}' source.txt > output.txt
I'm not quite sure how to parse the attached file, but what I am trying to do is in a output file have the link (href=), name (after the <), and count (<top>) in 3 separate columns.
My attempt is the above... (2 Replies)
I am trying using awk to open an input file and check a column 2/field $2 and if there is a warning then that is displayed (variantchecker): G not found at position 459, found A instead. The attached Sample1.txt is that file. If in that column/field there is a black space, then the text after... (6 Replies)
I have a file of ~500,000 entries in the following:
file.txt
chr1 11868 12227 ENSG00000223972.5 . + HAVANA exon . gene_id "ENSG00000223972.5"; transcript_id "ENST00000456328.2"; gene_type "transcribed_unprocessed_pseudogene"; gene_status "KNOWN"; gene_name "DDX11L1"; transcript_type... (17 Replies)
Discussion started by: cmccabe
17 Replies
LEARN ABOUT DEBIAN
parrec2nii
PARREC2NII(1) User Commands PARREC2NII(1)NAME
parrec2nii - convert PARREC image to NIfTI
SYNOPSIS
parrec2nii [OPTIONS] <PAR files>
DESCRIPTION
PAR/REC to NIfTI converter
OPTIONS --version
show program's version number and exit
-h, --help
show this help message and exit
-v, --verbose
Make some noise.
-o OUTDIR, --output-dir=OUTDIR
Destination directory for NIfTI files. Default: current directory.
-c, --compressed
Whether to write compressed NIfTI files or not.
--origin=ORIGIN
Reference point of the q-form transformation of the NIfTI image. If 'scanner' the (0,0,0) coordinates will refer to the scanner's
iso center. If 'fov', this coordinate will be the center of the recorded volume (field of view). Default: 'scanner'.
--minmax=MINMAX
Mininum and maximum settings to be stored in the NIfTI header. If any of them is set to 'parse', the scaled data is scanned for the
actual minimum and maximum. To bypass this potentially slow and memory intensive step (the data has to be scaled and fully loaded
into memory), fixed values can be provided as spaceseparated pair, e.g. '5.4 120.4'. It is possible to set a fixed minimum as scan
for the actual maximum (and vice versa). Default: 'parse parse'.
--store-header
If set, all information from the PAR header is stored in an extension of the NIfTI file header. Default: off
--scaling=SCALING
Choose data scaling setting. The PAR header defines two different data scaling settings: 'dv' (values displayed on console) and 'fp'
(floating point values). Either one can be chosen, or scaling can be disabled completely ('off'). Note that neither method will
actually scale the data, but just store the corresponding settings in the NIfTI header. Default: 'dv'
parrec2nii 1.2.2 June 2012 PARREC2NII(1)