PARREC2NII(1) User Commands PARREC2NII(1)
NAME
parrec2nii - convert PARREC image to NIfTI
SYNOPSIS
parrec2nii [OPTIONS] <PAR files>
DESCRIPTION
PAR/REC to NIfTI converter
OPTIONS
--version
show program's version number and exit
-h, --help
show this help message and exit
-v, --verbose
Make some noise.
-o OUTDIR, --output-dir=OUTDIR
Destination directory for NIfTI files. Default: current directory.
-c, --compressed
Whether to write compressed NIfTI files or not.
--origin=ORIGIN
Reference point of the q-form transformation of the NIfTI image. If 'scanner' the (0,0,0) coordinates will refer to the scanner's
iso center. If 'fov', this coordinate will be the center of the recorded volume (field of view). Default: 'scanner'.
--minmax=MINMAX
Mininum and maximum settings to be stored in the NIfTI header. If any of them is set to 'parse', the scaled data is scanned for the
actual minimum and maximum. To bypass this potentially slow and memory intensive step (the data has to be scaled and fully loaded
into memory), fixed values can be provided as spaceseparated pair, e.g. '5.4 120.4'. It is possible to set a fixed minimum as scan
for the actual maximum (and vice versa). Default: 'parse parse'.
--store-header
If set, all information from the PAR header is stored in an extension of the NIfTI file header. Default: off
--scaling=SCALING
Choose data scaling setting. The PAR header defines two different data scaling settings: 'dv' (values displayed on console) and 'fp'
(floating point values). Either one can be chosen, or scaling can be disabled completely ('off'). Note that neither method will
actually scale the data, but just store the corresponding settings in the NIfTI header. Default: 'dv'
parrec2nii 1.2.2 June 2012 PARREC2NII(1)