I have lot of files whose names are something like the following. I want to change the name of all the files from 'npt02' to 'n02'.
npt02-z30-sr65-rgdt0p50-dc0p01-16x12drw.tpf
npt02-z30-sr65-rgdt0p50-dc0p01-8x6drw.back
npt02-z30-sr65-rgdt0p50-dc0p01-8x6drw-bst-mis.xy... (5 Replies)
I was wondering if someone could help me with this:
I have multiple directories and subdirectories with files in them. I need to move all files from all directories and subdirectories into one root directory. However, when i do
find /home/user -mindepth 1 -iname "*" -type f -exec mv {} . \;
... (3 Replies)
So I am trying to get my juices flowing on another korn shell scripting project I need to do. I hope my examples here will allow someone to get me pointed in the right direction. I hope I am clear with what I am trying to do.
Example:
/incomplete/file1v1c1
/incomplete/temp1v1c1... (2 Replies)
Hi,
I would like to write a loop to change the names of files in a directory. The files are called data1.txt through data1000.txt. I'd like to change their names to a1.txt through a1000.txt. How do I go about doing that? Thanks! (2 Replies)
Hi,
I have a list of names (in a text file) like this:
SRR1234
SRR5678
SRR4321
SRR8876
I'd like to have a unix code to find all the files which have any of above strings in their name and move them to a specific directory. I have my files distributed in many subdirectories so it has to... (3 Replies)
I have file names as shown and want to change the name to have only the first four numbers.
/home/chrisd/Desktop/nips/nips_2013/5212-learning-feature-selection-dependencies-in-multi-task-learning.pdf
/home/chrisd/Desktop/nips/nips_2013/5213-parametric-task-learning.pdf... (3 Replies)
I have a series of files as follows
file-1.pdf
file-2.pdf
file-3.pdf
file-4.pdf
file-5.pdf
file-6.pdf
file-7.pdf
I want to have the file names with odd numbers
starting from an initial number, for example 2000.
The result would be the following:
file-2001.pdf
file-2003.pdf... (9 Replies)
NPS2GPS(1) General Commands Manual NPS2GPS(1)NAME
nps2gps - convert nucleotide-protein sets to ASN.1 genomic product sets
SYNOPSIS
nps2gps [-] [-D] [-F] [-G str] [-L] [-N] [-P] [-Q] [-R] [-T] [-U] [-f str] [-i filename] [-o filename] [-p path] [-r path] [-x str]
DESCRIPTION
nps2gps converts NCBI Bioseq-sets from simple nucleotide-protein sets to full genomic product sets complete with mRNA transcripts, which it
outputs as text ASN.1.
OPTIONS
A summary of options is included below.
- Print usage message
-D RefSeq mRNA Titles
-F Map by Feature ID
-G str General ID database name
-L Lock components in advance
-N Promote Non-coding RNAs
-P mRNA ID from Protein
-Q Special mRNA titles
-R Enable Remote fetching from ID
-T Map by Transcript ID
-U Remove Unnecessary gene cross-references
-f str Substring filter
-i filename
Single input file (default = stdin)
-o filename
Single output file (default = stdout)
-p path
Path to files for batch conversion
-r path
Path for results of batch conversion
-x str File selection suffix for batch conversion (default = .ent)
AUTHOR
The National Center for Biotechnology Information.
SEE ALSO asn2asn(1), asn2ff(1), asn2gb(1), asn2xml(1), asndhuff(1).
NCBI Tools User's Manual 2012-06-24 NPS2GPS(1)