10 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
OS : Oracle Linux 6.8
shell : bash
As shown below, I have multiple files like below (query1-extract_aa, query1-extract_ab, query1-extract_ac, ....)
$ ls -l
total 235680
-rw-rw-r-- 1 reportusr reportusr 30M May 3 11:25 query1-extract_aa
-rw-rw-r-- 1 reportusr reportusr 30M May 3 11:25... (5 Replies)
Discussion started by: kraljic
5 Replies
2. Shell Programming and Scripting
Hey guys,
I have wrote the following script to apply a module named "trinity" on my files. (it takes two input files and spit a trinity.fasta as output)
#!/bin/bash -l
#SBATCH -p node
#SBATCH -A <projectID>
#SBATCH -n 16
#SBATCH -t 7-00:00:00
#SBATCH --mem=128GB
#SBATCH --mail-type=ALL... (1 Reply)
Discussion started by: @man
1 Replies
3. Shell Programming and Scripting
there are mutiple file nams in the directory. How to return the the lastest files for each file name.
ex.
abc1234_050201
abc1234_050206
abc1234_050208
xyz34_050204
xyz34_050210
xyz34_050218
thanks (4 Replies)
Discussion started by: grand_sam
4 Replies
4. UNIX for Dummies Questions & Answers
Hi,
Is there any way to do a cat * where it shows the name of each file in the process? Similar to what more does below?
$ more ?.sql
::::::::::::::
1.sql
::::::::::::::
set linesize 200
select db_unique_name,
cast(
from_tz(
cast(... (5 Replies)
Discussion started by: newbie_01
5 Replies
5. Shell Programming and Scripting
Hi,
I have hundreds of files with XXX in their file name and I want to rename all of them with YYY in place of XXX.
for ex:
$ ls -1
123XXX789
345XXX678
Output
$ ls -1
123YYY789
345YYY678
I know we can loop in each file and sed to replace and rename each file but ren *XXX* *YYY*... (4 Replies)
Discussion started by: reddyr
4 Replies
6. UNIX for Dummies Questions & Answers
Hey guys, I am the definition of a newbie. I am in the process of trying to rip all my dvds onto a new HTPC I setup. While doing this, I am also trying to organize a bunch of other files I already have to proper naming conventions. So far I have just been naming each file separately (I am on a... (4 Replies)
Discussion started by: Ralze34
4 Replies
7. Shell Programming and Scripting
I want a script that will add comments to a file before check-in files. comments depend on type of files.
i have a script to list files in the directory that will be checked-in
There are xml, js, html, vm files. vm will use comments like c/c++ ( // or /*..*/)
can you help me add a comment line... (0 Replies)
Discussion started by: pradeepmacha
0 Replies
8. Shell Programming and Scripting
Hello,
I am trying to write a bash shell script that does the following:
1.Finds all *.txt files within my directory of interest
2. reads each of the files (25 files) one by one (tab-delimited format and have the same data format)
3. skips the first 10 rows of the file
4. extracts and... (4 Replies)
Discussion started by: manishabh
4 Replies
9. Shell Programming and Scripting
Hi All,
I have a file like below:
1016D"ddd","343","1299"
1016D"ddd","3564","1299"
1016D"ddd","3297","1393"
1016D"ddd","32989","1527"
1016D"ddd","346498","1652"
2312D"ddd","3269","1652"
2312D"ddd","328","1652"
2312D"ddd","2224","2100"
3444D"ddd","252","2100"
3444D"ddd","2619","2100"... (4 Replies)
Discussion started by: deepakgang
4 Replies
10. Shell Programming and Scripting
Hi,
I'm trying to write a command that backs up certain files into my current directory and adds a prefix to the backed up file name. I realise this can be done in a script by specifying each individual file but would like to know if it can be done on one line and made an alias.
I have the... (5 Replies)
Discussion started by: m223464
5 Replies