10 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
Hi,
Brand new to these forums, and I hope that someone can help me out.
I'm trying to run the following command in UNIX
java -jar GenomeAnalysisTK.jar -T SplitSamFile -dt NONE -R reference.fa -I my.bam --outputRoot /my/path/SampleFiles/Sample_
It executes the SplitSamFile from GATK, but I... (3 Replies)
Discussion started by: Wixaros
3 Replies
2. UNIX for Dummies Questions & Answers
Hi
Im using MobaXterm Unix on my windows XP.I want to compile java in unix.I have installed java to the following path C:\Program Files\Java\jdk1.7.0_09\bin
In order to compile the java prog im typing the following command after entering into the bin directory:
C:\Program... (2 Replies)
Discussion started by: ak3141
2 Replies
3. Shell Programming and Scripting
Hi All,
I am trying to run a grep command which creates an output file.
Then I will run a java file which take that file and process that. My java file uses other java files and library jars.
I have tried below code but I am getting compilation error,it can not find other java files in same... (1 Reply)
Discussion started by: kmajumder
1 Replies
4. SuSE
Hello All,
I'm using my Ubuntu 10.04 client connected via SSH to a SuSE Linux server (SuSE Linux Enterprise Server 11 (x86_64) version 11 patchlevel=1).
I'm trying to run an install of WebSphere Portal but can't seem to be able to run the GUI installer.
Running xclock as root returns this... (7 Replies)
Discussion started by: kartrait
7 Replies
5. Solaris
I have installed IBM Java Runtime V1.4.2 in solaris. but when i give java -version, it gets me this:java version "1.5.0_20"
Java(TM) 2 Runtime Environment, Standard Edition (build 1.5.0_20-b02)
Java HotSpot(TM) Client VM (build 1.5.0_20-b02, mixed mode, sharing)
can you please tell me how do i... (3 Replies)
Discussion started by: ichwaiznicht
3 Replies
6. Programming
Greeings all
Im trying to excute a command from Java and direct the output to the main output screen or to another file .... can you please help with this ? can I use filewriter for this ?
Here is my code....
import java.io.BufferedReader;
import java.io.File;
import java.io.FileWriter;... (3 Replies)
Discussion started by: yahyaaa
3 Replies
7. UNIX for Dummies Questions & Answers
Hello everyone,
Just started UNIX today! In our school we use solaris. I just want to know how do I setup Solaris 10 not the GUI one, the one where you have to type the commands like ECHO, ls, pwd, etc... I have windows xp and I also have vmware.
I hope I am not missing anything! :p (4 Replies)
Discussion started by: Hanamachi
4 Replies
8. Shell Programming and Scripting
I'm currently working on my second ever ksh script!
So I apologize if this is a stupid question - I've searched the forum and on google and haven't seen anything :confused:
I'm running my script with an input at startup
that variable determines a couple of other values(int) that I store into... (1 Reply)
Discussion started by: Cailet
1 Replies
9. UNIX for Dummies Questions & Answers
Hi,
How do I "run a script"?
I'm trying to start up some software called ElectroServer 3, and was told I just needed to "run the start script from the terminal to get things going".
From the terminal, i use cd command to change to the software's directory, and I guess the script in question is... (4 Replies)
Discussion started by: waking_bear
4 Replies
10. UNIX for Dummies Questions & Answers
HI, I want to run my .java file on a SunOS 5.8 Unix machine. The java file is writen with Ready to Program (Similar to Jbuilder) on a PC.
Thanks!! (3 Replies)
Discussion started by: leotopia
3 Replies