modifying ls() to support the display of file sequences?
Hi there, I'm new to the board and I did try a search, but couldn't quite find what I was looking for.
I deal in mostly large sets of sequential files, usually images. I was wondering if someone has modified the standard ls() command, or created another command that would display standardly named, sequential files as a single listing in the directory.
For example, I have 3,000 files in a single directory with a name structure like:
Sorry, I should have included an example for the output - I was hoping to see the sequence of files as a single entry in the listing, like the above example, or perhaps like this:
Ocean_Current_Mask.####.exr
There are several tools on other operating systems that can show sequences like this, even some Applications. Nuke (a image compositing program) shows all sequences in this manner. It's much easier to see a single listing of sequences sometimes, rather than the individual files.
Hi,
I have a fasta file with multiple sequences. How can i get only unique sequences from the file.
For example
my_file.fasta
>seq1
TCTCAAAGAAAGCTGTGCTGCATACTGTACAAAACTTTGTCTGGAGAGATGGAGAATCTCATTGACTTTACAGGTGTGGACGGTCTTCAGAGATGGCTCAAGCTAACATTCCCTGACACACCTATAGGGAAAGAGCTAAC
>seq2... (3 Replies)
Hi. I've tried several different programs to try and solve this problem, but none of them seem to have done exactly what I want (and I need the file in a very specific format). I have a large file of DNA sequences in a multifasta file like this, with around 15 000 genes:
... (2 Replies)
Hello friends,
Could anyone please advise on how to remove escape sequences from a text file?
$ file input.txt
input.txt: ASCII English text, with escape sequences
I'm able to see those escape characters when opened in vi editor like shown below:
^
but not when I run more... (6 Replies)
I have two files. File1 is shown below.
>153L:B|PDBID|CHAIN|SEQUENCE
RTDCYGNVNRIDTTGASCKTAKPEGLSYCGVSASKKIAERDLQAMDRYKTIIKKVGEKLCVEPAVIAGIISRESHAGKVL
KNGWGDRGNGFGLMQVDKRSHKPQGTWNGEVHITQGTTILINFIKTIQKKFPSWTKDQQLKGGISAYNAGAGNVRSYARM
DIGTTHDDYANDVVARAQYYKQHGY
>16VP:A|PDBID|CHAIN|SEQUENCE... (7 Replies)
I have a text file, input.fasta contains some protein sequences. input.fasta is shown below.
>P02649
MKVLWAALLVTFLAGCQAKVEQAVETEPEPELRQQTEWQSGQRWELALGRFWDYLRWVQT
LSEQVQEELLSSQVTQELRALMDETMKELKAYKSELEEQLTPVAEETRARLSKELQAAQA
RLGADMEDVCGRLVQYRGEVQAMLGQSTEELRVRLASHLRKLRKRLLRDADDLQKRLAVY... (8 Replies)
My file looks like this
But I need to remove the entry with the identifier >Reference1 along with the entire sequence. Thus, I will end up having the following file
Thanks in advance! (2 Replies)
I can run xclock from root but not able to run in a user (oracle)
I am getting this error during installation of ORACLE-10g (10.2) in Solaris-10 (X86).............when I do ./runInstaller
when ever try, getting this error.......
DISPLAY not set. Please set the DISPLAY and try again. or... (2 Replies)