awk two succeeding lines and moving matching files
Hello everyone
I have a few hundreds of .mol2 files that has this pattern
among them, some of the files are missing the line after the @<TRIPOS>BOND and they look like
I'm trying to find all the files in my working directory that are missing the numeric line after the `@<TRIPOS>BOND` and move them to another directory. I know this is a simple task, but I am quite new to Linux.
Here's one of my codes, which I was planning to write in a for loop. It doesn't do the job, but I am showing it to show one of my trials.
I know my code is really inefficient, but I am not an expert with Lunix at all.
The awk below executes and is close (producing the first 4 columns in desired). However, when I add the sum of $7, I get nothing returned. Basically, I am trying to combine all the matching $4 in f1 and output them with the average of $7 in each match. Thank you :).
f1
... (2 Replies)
In the tab delimited files below I am trying to match $2 in file1 to $2 of file2. If a match is found the awk checks $3 of file2 and if it is greater than 40% and $4 of file2 is greater than 49, the line in file1 is printed. In the desired output line3 of file1 is not printed because $3 off file2... (9 Replies)
I am trying to combine all matching lines in the tab-delimited using awk. The below runs but no output results. Thank you :).
input
chrX 110925349 110925532 ALG13
chrX 110925349 110925532 ALG13
chrX 110925349 110925532 ALG13
chrX 47433390 47433999 SYN1... (3 Replies)
Given this file (I separated them in block to make my explanation clearer):
92157768877;Sof_deme_Fort_Email_am_%yyyy%%mm%%dd%;EMAIL;20/02/2015;1;0;0
92157768877;Sof_trav_Fort_Email_am_%yyyy%%mm%%dd%;EMAIL;20/02/2015;1;0;0
91231838895;Sof_deme_faible_Email_am;EMAIL;26/01/2015;1 0;0... (1 Reply)
Hi All,
I'm looking to use AWK to pattern match lines in XML file - Example patten for below sample would be /^<apple>/
The sample I wrote out is very basic compared to what I am actually working with but it will get me started
I would like to keep the matched line(s) unchanged but have them... (4 Replies)
Hi,
I have two comma separated files. I would like to see field 1 value of File1 exact match in field 2 of File2. If the value matches, then it should print matched lines from File2. I have achieved the results using cut, paste and egrep -f but I would like to use awk as it is efficient way and... (7 Replies)