10 More Discussions You Might Find Interesting
1. UNIX for Beginners Questions & Answers
For some reason I am having difficulty performing what should be a fairly easy task. I would like to print lines of a file that have a unique value in the first field. For example, I have a large data-set with the following excerpt:
PS003,001 MZMWR/ L-DWD// *
PS003,001... (4 Replies)
Discussion started by: jvoot
4 Replies
2. Shell Programming and Scripting
In the awk below I am trying to print the entire line, along with the header row, if $2 is SNV or MNV or INDEL. If that condition is met or is true, and $3 is less than or equal to 0.05, then in $7 the sub pattern :GMAF= is found and the value after the = sign is checked. If that value is less than... (0 Replies)
Discussion started by: cmccabe
0 Replies
3. Shell Programming and Scripting
Hello All,
This is to request some assistance on the issue that I encountered until recently.
Problem is:
I have a pipe delimited file in which some lines/records are broken. Now, I have to join/concatenate broken lines in the file to form actual record to make sure that the count of records... (8 Replies)
Discussion started by: svks1985
8 Replies
4. Shell Programming and Scripting
Hi Folks,
I have a file with fields as follows which has last field in multiple lines. I would like to combine a line which has three fields with single field line for as shown in expected output. Please help.
INPUT
hname01 windows appnamec1eda_p1, ... (5 Replies)
Discussion started by: shunya
5 Replies
5. Shell Programming and Scripting
I am trying to add a condition to the below perl that will capture the GTtag and place a specific string in the last field of each line. The problem is that the GT value used is not right after the tag rather it is a few fields away. The values should always be 0/1 or 1/2 and are in bold in the... (12 Replies)
Discussion started by: cmccabe
12 Replies
6. UNIX for Dummies Questions & Answers
hi
i have a file with the following lines
2303:13593:137135 16 abc1 26213806.......
1234:45675:123456 16 bbc1 9813806.......
2303:13593:137135 17 bna1 26566444....
1234:45675:123456 18 nnb1 98123456.......
i want to join the lines having common 1st field i,e.,
... (1 Reply)
Discussion started by: anurupa777
1 Replies
7. Shell Programming and Scripting
Hi,
I have an issue to combine multiple lines of a file. I have records as below.
Fields are delimited by TAB. Each lines are ending with a new line char (\n)
Input
--------
ABC 123456 abcde 987
890456 7890 xyz
ght gtuv
ABC 5tyin 1234 789
ghty kuio
ABC ghty jind 1234
678 ght
... (8 Replies)
Discussion started by: ratheesh2011
8 Replies
8. Shell Programming and Scripting
I have a csv file that I would like to remove duplicate lines based on field 1 and sort. I don't care about any of the other fields but I still wanna keep there data intact. I was thinking I could do something like this but I have no idea how to print the full line with this. Please show any method... (8 Replies)
Discussion started by: cokedude
8 Replies
9. Shell Programming and Scripting
Dear All,
I would like to add values of a field, if the lines match in a certain field. Then I would like to divide the sum though the number of lines that have a matched field. This is the Input:
Input:
Test1 5
Test1 10
Test2 2
Test2 5
Test2 13
Test3 4
Output:
Test1 7.5
Test1 7.5... (6 Replies)
Discussion started by: DerSeb
6 Replies
10. Shell Programming and Scripting
hello, hope you can help me:
ive got a file called archivos
The content or structure of this file is
./chu0/filechu
./chu1/filechu
I extract each line from this file manually and redirect to a file, and it Works fine, so the command line is:
awk ‘/chu0/ {print $0}' < archivos >... (8 Replies)
Discussion started by: alexcol
8 Replies
DIFF(1) General Commands Manual DIFF(1)
NAME
diff - differential file comparator
SYNOPSIS
diff [ -efbh ] file1 file2
DESCRIPTION
Diff tells what lines must be changed in two files to bring them into agreement. If file1 (file2) is `-', the standard input is used. If
file1 (file2) is a directory, then a file in that directory whose file-name is the same as the file-name of file2 (file1) is used. The
normal output contains lines of these forms:
n1 a n3,n4
n1,n2 d n3
n1,n2 c n3,n4
These lines resemble ed commands to convert file1 into file2. The numbers after the letters pertain to file2. In fact, by exchanging `a'
for `d' and reading backward one may ascertain equally how to convert file2 into file1. As in ed, identical pairs where n1 = n2 or n3 = n4
are abbreviated as a single number.
Following each of these lines come all the lines that are affected in the first file flagged by `<', then all the lines that are affected
in the second file flagged by `>'.
The -b option causes trailing blanks (spaces and tabs) to be ignored and other strings of blanks to compare equal.
The -e option produces a script of a, c and d commands for the editor ed, which will recreate file2 from file1. The -f option produces a
similar script, not useful with ed, in the opposite order. In connection with -e, the following shell program may help maintain multiple
versions of a file. Only an ancestral file ($1) and a chain of version-to-version ed scripts ($2,$3,...) made by diff need be on hand. A
`latest version' appears on the standard output.
(shift; cat $*; echo '1,$p') | ed - $1
Except in rare circumstances, diff finds a smallest sufficient set of file differences.
Option -h does a fast, half-hearted job. It works only when changed stretches are short and well separated, but does work on files of
unlimited length. Options -e and -f are unavailable with -h.
FILES
/tmp/d?????
/usr/lib/diffh for -h
SEE ALSO
cmp(1), comm(1), ed(1)
DIAGNOSTICS
Exit status is 0 for no differences, 1 for some, 2 for trouble.
BUGS
Editing scripts produced under the -e or -f option are naive about creating lines consisting of a single `.'.
DIFF(1)