10 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
I am trying to mv each of the .vcf files in the variants folder to the folder in /home/cmccabe/f2 that the .vcf id is found in file. $2 in file will always have the id of a .vcf in the variants folder. The line in blue staring with R_2019 in file up to the -v5.6 will always be an exact match to a... (4 Replies)
Discussion started by: cmccabe
4 Replies
2. Shell Programming and Scripting
I have a specific set (all ending with .bam) of downloaded files in a directory /home/cmccabe/Desktop/NGS/API/2-15-2016. What I am trying to do is use a match to $2 in name to rename the downloaded files. To make things a more involved the date of the folder is unique and in the header of name... (1 Reply)
Discussion started by: cmccabe
1 Replies
3. Shell Programming and Scripting
The below bash connects to a site, downloads a file, searches that file based of user input - could be multiple (all that seems to work). What I am not able to figure out is how to display on the screen match found or no match found" and write a file to a directory (C:\Users\cmccabe\Desktop\wget)... (4 Replies)
Discussion started by: cmccabe
4 Replies
4. Shell Programming and Scripting
Gents,
file1
S 65733.00 19793.00 1 0 318592.8 2792489.5 29.1063000008
S 65733.00 19801.00 1 0 323120.8 2789153.6 13.3063000044
S 66009.00 19713.00 1 0 318672.7 2792538.2 30.6063000120
S 65801.00 19799.00 1 ... (2 Replies)
Discussion started by: jiam912
2 Replies
5. Shell Programming and Scripting
Hello all,
I have file like this:
file 1:
aa
bb
cc
dd
ee
file2:
111
111
111
111
111
111 (2 Replies)
Discussion started by: attila
2 Replies
6. Shell Programming and Scripting
hi i want to know how to do this
if the given is /tmp/ and it is a valid directory then it will echo directory
if the given is /tmp/file.txt and is a valid file then it will echo file..
thanks! (5 Replies)
Discussion started by: h0ujun
5 Replies
7. Shell Programming and Scripting
I am trying to sort the following files from folder Bag to Apple, Cat Food, Dog Food. I can get all of the files I want into a new folder, but not sure of the best approch to get them to their final directory
My Files
==========
apple.1234.ext
apple.1235.ext
cat food 101.ext
Cat Food... (2 Replies)
Discussion started by: mtschroeder
2 Replies
8. UNIX for Dummies Questions & Answers
Hi,
I have the ff. list of files in the dir named /home/joule/unix/archive:
$ /home/joule/unix/archive
joule1.gz
joule2.gz
joule3.gz
joule4.gz
joule5.gz
joule6.gz
joule7.gz
joule8.gz
What I would like to do is to find this string in a group of files in the directory above:
String to... (1 Reply)
Discussion started by: Joule
1 Replies
9. Shell Programming and Scripting
Hi
I am trying to fetch the rows with match string "0000001234"
Input file looks like below:
09 0 XXX 0000001234 Z 1
09 0 XXX 0000001234 Z 1
09 0 XXX 0000001234 Z 1
09 0 XXX 0000001234 Z 1
09 0 XXX 0000001234 Z 1... (6 Replies)
Discussion started by: nareshk
6 Replies
10. Shell Programming and Scripting
Hi, Can you help please.
I have the following comand:
if ]; then
l_valid_string="Y"
fi
The problem I am trying to solve is that my l_string = ABC and my file contains
ABC
ABC_EFG
I only want back the value ABC exact match. (3 Replies)
Discussion started by: CAGIRL
3 Replies