Parse line based on highest value


 
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# 1  
Old 10-25-2013
Parse line based on highest value

Hello,

Does anyone know how to parse whole line that has highest value in last column (c12), based on the string in column 6 (column VIRUS)

INPUT:
Code:
5	7	4	8	3	VIRUS1	5	5	HUMAN1	8	4	100
6	9	7	2	6	VIRUS1	6	0	HUMAN2	6	2	80
9	6	7	3	7	VIRUS1	9	7	HUMAN3	5	9	70
8	5	3	8	6	VIRUS2	8	6	HUMAN4	8	6	95
4	7	2	7	0	VIRUS2	2	5	HUMAN5	9	1	40
7	4	7	3	0	VIRUS2	4	8	HUMAN6	3	7	75


In the end, I only want one representation of string in column 6 (column VIRUS) that has the highest value in column 12.

OUTPUT:
Code:
5	7	4	8	3	VIRUS1	5	5	HUMAN1	8	4	100
8	5	3	8	6	VIRUS2	8	6	HUMAN4	8	6	95

Thank you so much!
# 2  
Old 10-25-2013
Something like:
Code:
awk '
v[$6] < $12 { v[$6] = $12;l[$6] = $0 }
END { for(i in l) print l[i] }' file

seems to do what you want as long as the output order doesn't matter.

If you want to try this on a Solaris/SunOS system, replace awk with /usr/xpg4/bin/awk, /usr/xpg6/bin/awk, or nawk.
This User Gave Thanks to Don Cragun For This Post:
# 3  
Old 10-25-2013
Another way:

Code:
sort -k6,6 -k12,12nr filename | awk '!line[$6]++'

This User Gave Thanks to mjf For This Post:
# 4  
Old 10-28-2013
Thank you very much, Don Cragun. It works perfectly.
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