10 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
I have some text files in a folder f1 with 10 columns. The first five columns of a file are shown below.
aab abb 263-455 263 455
aab abb 263-455 263 455
aab abb 263-455 263 455
bbb abb 26-455 26 455
bbb abb 26-455 26 455
bbb aka 264-266 264 266
bga bga 230-232 230 ... (10 Replies)
Discussion started by: gomez
10 Replies
2. Shell Programming and Scripting
I have 500 text files in a folder. The data of the text files are shown below.
USA Germany 23-12
USA Germany 23-12
USA Germany 23-12
France Germany 15-12
France Germany 15-12
France Italy 25-50
China China 30-32
China China 30-32
I would... (1 Reply)
Discussion started by: sahith
1 Replies
3. UNIX for Dummies Questions & Answers
Hi,
Is there a command to do a sensitive/in-sensitive search for a string on a line and print how many times that string appears?
For example, if I have a line of text below:
dog cat rat apple banana dog lion tiger dog
Is there a command to search for dog that will print out 3 as a... (7 Replies)
Discussion started by: newbie_01
7 Replies
4. Shell Programming and Scripting
Hi
Im a very inexperienced bioinformatician
I have a large DNA file with about 10000 lines of sequence and need to count the occurrence of TA for each line
for example in the file
TACGCGCGATA
TATATATA
GGCGCGTATA
I would like to get an output like:
2
4
2
I have tried... (3 Replies)
Discussion started by: Manchesterpaul
3 Replies
5. UNIX for Dummies Questions & Answers
Hi,
I have the following text in a file:
ISA*00* *00* *ZZ*ENS_EDI *ZZ*GATE0215 *110106*2244*U*00401*006224402*1*P*>~
GS*HP*ENS_EDI*GATE0215*20110106*2244*6224402*X*004010X091A1~
ST*835*00006~... (2 Replies)
Discussion started by: donisback
2 Replies
6. Shell Programming and Scripting
Hi experts a have a very large file and I need to add two columns: the first one numbering the incidence of records and the another with the total count
The input file:
21 2341 A
21 2341 A
21 2341 A
21 2341 C
21 2341 C
21 2341 C
21 2341 C
21 4567 A
21 4567 A
21 4567 C
... (6 Replies)
Discussion started by: juelillo
6 Replies
7. Shell Programming and Scripting
I have a sorted file like:
Apple 3
Apple 5
Apple 8
Banana 2
Banana 3
Grape 31
Orange 7
Orange 13
I'd like to search $1 and if $1 is not the same as $1 in the previous row print that row and print the number of times $1 was found.
so the output would look like:
Apple 8 3
Banana... (2 Replies)
Discussion started by: dcfargo
2 Replies
8. Shell Programming and Scripting
I have a file with contents similar to this.
abcd
1234
4567
7666
jdjdjd
89289
9382
92
jksdj
9823
298
I want to write a shell script which count the number of lines that start with the number (disregard the lines starting with alphabets) (1 Reply)
Discussion started by: grajp002
1 Replies
9. Shell Programming and Scripting
How do I count the total number of unique strings from a file using Perl? Any help is appreciated.. (6 Replies)
Discussion started by: my_Perl
6 Replies
10. Shell Programming and Scripting
I use grep -c often, but cannot for the life of me count the number of occurences of a string on the same line (or within a file):
$ cat myfile
hello457903485897hello
34329048hellojsdfkljlaskdjgh182390
$ grep -c
2
$
How do I count the number of occurences of "hello" in myfile (i.e. 3)?... (6 Replies)
Discussion started by: cs03dmj
6 Replies