perl Can't coerce array into hash at

10 More Discussions You Might Find Interesting

1. Shell Programming and Scripting

Perl hash of hashes anonymous array

Hello experts. I'm having problems with a snippet of code. I was hoping to get help/advice to correct. A file that this script parses has changed to the point where I can no longer use a scalar, it looks as though I need to create an array for a hash of hashes below. The first output of...

2. Shell Programming and Scripting

Perl : Assigning multile hash values to a single array

I know that @food = %fruit; Works. But how do I assign %fruit and %veggies to @food ?

3. Programming

Perl Array within an hash

Hi All I have been using a curl code to output an hash that looks like this $VAR1 = { 'data'...

4. Shell Programming and Scripting

Compare values of hashes of hash for n number of hash in perl without sorting.

Hi, I have an hashes of hash, where hash is dynamic, it can be n number of hash. i need to compare data_count values of all . my %result ( $abc => { 'data_count' => '10', 'ID' => 'ABC122', } $def => { 'data_count' => '20', 'ID' => 'defASe', ...

5. Shell Programming and Scripting

array of hash - perl

How do I get the unique hashes from an array of hashes? @ar1 = ( {a=>1,b=>2}, {c=>3,d=>4},{a=>1,b=>2});I need : @ar2 = ( {a=>1,b=>2}, {c=>3,d=>4});Thanks.

6. Shell Programming and Scripting

perl - need help with 2 arrays to hash or 2d array?

I have 2 arrays: @array1 outputs the following: 1 1 1 2 @array2 outputs the following A B C D

7. Shell Programming and Scripting

Array of hash in perl does not work

Hi , I have an input.txt file that i read node: id= c1, class=nb, cx=100, cy=100, r=10 node: id=c2, class=b, cx=150, cy=130, r=10 node: id=c3, class=nb, cx=50, cy=80, r=10 node: id=c4, class=nb, cx=120, cy=200, r=10 i split over , and = to create a global array and then passed it to a...

8. Shell Programming and Scripting

PERL, push to hash of array problem

$key = "a"; $value = "hello"; %myhash = {} ; push @{ myHash{$key} }, $hello; print $myHash{$key}."\n"; this script prints "hello" but has following error message. Reference found where even-sized list expected at ./test line 5. can any one help me to fix this problem??

9. Shell Programming and Scripting

perl array question from going through hash

suppose my @{$data1{$callid}}; cotains one two three three five six one two three of random patterns but each item is separated by white space or tab, Below code extract and get rid of the whitespace perfectly so that it shows now like this onetwothree threefivesix...

10. Shell Programming and Scripting

hash,array and perl

Hi,i have a code fragment below. %tag = (); #line 1 $tag{'info'} = $datastring; #line 2 $resp = $ua->request( #$ua is a user agent POST 'http://10.2.3.0' , Content_Type => application/x-www-form-urlencoded Content => #line 3 I am not sure of what the code...

LEARN ABOUT DEBIAN

re-pcr

RE-PCR(1)						      General Commands Manual							 RE-PCR(1)

NAME

       re-PCR -- Find sequence tagged sites (STS) in DNA sequences

SYNOPSIS

       re-PCR [-hV] -p hash-file [-g gaps] [-n mism] [-lq] [primer ...]

       re-PCR [-hV] -P hash-file [-g gaps] [-n mism] [-l] [-m margin] [-O+|-] [-C batchcnt] [-o outfile] [-r+|-] [primers-file ...]

       re-PCR [-hV] -s hash-file [-g gaps] [-n mism] [-lq] [-m margin] [-o outfile] [-r+|-] [left right lo[-hi] [...]]

       re-PCR [-hV] -S hash-file [-g gaps] [-n mism] [-lq] [-m margin] [-O+|-] [-C batchcnt] [-o outfile] [-r+|-] [stsfile ...]

DESCRIPTION

       Implements reverse searching (called Reverse e-PCR) to make it feasible to search the human genome sequence and other large genomes by per-
       forming STS and primer searches.

OPTIONS

       -p=hash-file
		 Perform primer lookup using hash-file

       -P=hash-file
		 Perform primer lookup using hash-file

       -s=hash-file
		 Perform STS lookup using hash-file

       -S=hash-file
		 Perform STS lookup using hash-file

       -n=mism	 Set max allowed mismatches per primer for lookup

       -g=gaps	 Set max allowed indels per primer for lookup

       -m=margin Set variability for STS size for lookup

       -l	 Use presize alignments (only if gaps>0)

       -G	 Print alignments in comments

       -d=min-max
		 Set default STS size

       -r=+|-	 Enable/disable reverse STS lookup

       -O=+|-	 Enable/disable syscall optimisation

       -C=batchcnt
		 Set number of STSes per batch

       -o=outfile
		 Set output file name

       -q	 Quiet (no progress indicator)

EXAMPLE

	famap -tN -b genome.famap org/chr_*.fa

	fahash -b genome.hash -w 12 -f3 ${PWD}/genome.famap

	re-PCR -s genome.hash -n1 -g1 ACTATTGATGATGA AGGTAGATGTTTTT 120-200

       See famap(1) and fahash(1)

SEE ALSO

       /usr/share/doc/ncbi-epcr/README.txt

       bioperl(1), e-pcr(1), famap(1) and fahash(1)

AUTHORS

       This manual page was written by Andreas Tille <tille@debian.org> for the Debian system (but may be used by others).  Permission is  granted
       to copy, distribute and/or modify this document under the terms of the GNU General Public License, Version 2 any later version published by
       the Free Software Foundation.

       On Debian systems, the complete text of the GNU General Public License can be found in /usr/share/common-licenses/GPL.

								    April 2008								 RE-PCR(1)

Shell Programming and Scripting