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1. UNIX for Beginners Questions & Answers
Hi,
I need help to match patterns from between two different files and extract region of strings.
inputfile1.fa
>l-WR24-1:1
GCCGGCGTCGCGGTTGCTCGCGCTCTGGGCGCTGGCGGCTGTGGCTCTACCCGGCTCCGG
GGCGGAGGGCGACGGCGGGTGGTGAGCGGCCCGGGAGGGGCCGGGCGGTGGGGTCACGTG... (4 Replies)
Discussion started by: bunny_merah19
4 Replies
2. Shell Programming and Scripting
Hello.
For a given folder, I want to select any files find $PATH1 -f \( -name "*" but omit any files like pattern name ! -iname "*.jpg" ! -iname "*.xsession*" ..... \) and also omit any subfolder like pattern name -type d \( -name "/etc/gconf/gconf.*" -o -name "*cache*" -o -name "*Cache*" -o... (2 Replies)
Discussion started by: jcdole
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3. Shell Programming and Scripting
I have a list in the format below, how do I read through the list and extract the lines between the ##START## and ##END##, so i can check for specific values between each ##START## & ##END## pattern
##START##
RANDOMTEXT
DFGSD
SDFSDF
##END##
##START##
morestuff
sdfggfg
sdfsdf... (10 Replies)
Discussion started by: squrcles
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4. Shell Programming and Scripting
Hi
I have two lists of patterns named A and B consisting of around 200 entries in each and I want to extract all the sentences from a big text file which match atleast one pattern from both A and B.
For example, pattern list A consists of :
ama
ani
ahum
mari
...
...
and pattern... (1 Reply)
Discussion started by: my_Perl
1 Replies
5. Shell Programming and Scripting
Hi,
I have a file with many lines and need to extract lines between 2 patterns (AAA and BBB) and merge all the in-between lines into single line separated by space.
$ cat file1
blah blah blah
blah AAA
1
2
3
blah BBB
blah blah blah
blah blah blah
blah blah blah
AAA
5
6
blah blah... (4 Replies)
Discussion started by: prvnrk
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6. Shell Programming and Scripting
Hi All,
I want to extract the text between some pattern which occurs repeatedly in a file. For example my input is like,
/home/.....
..........java:25: cannot find symbol
............
/home/......
/home/.......
I want to display... (2 Replies)
Discussion started by: Vignesh58
2 Replies
7. Shell Programming and Scripting
Hi All,
I need a script to extract a lines between two patterns.I have done this using grep,cut,tail and head.But its very slow, because my input file contain more than a lakh.
COMMAND:XXXXXXXXXXXXXXXXXXXX
yyyyy
zzzzzz
REQUESTSTRING:aaaaaaaaaaaaaaa;11111
222222
333333... (4 Replies)
Discussion started by: rajamohan
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8. UNIX for Dummies Questions & Answers
%%%%% (9 Replies)
Discussion started by: lucasvs
9 Replies
9. Shell Programming and Scripting
Hi All,
I tried extracting this pattern using grep but it did not work.
What I have is a file which has contents like this:
file:///channel/add-adhd.html
file:///channel/allergies.html
file:///channel/arthritis.html
http://mail.yahoo.com/
http://messenger.yahoo.com/... (2 Replies)
Discussion started by: shoaibjameel123
2 Replies
10. Shell Programming and Scripting
Sample input:
Loading File System
Networking in nature
Closing the System
now i need to extract the patterns between the words File and Closing:
i.e. sample output:
System
Networking in Nature
Thanks in advance !!!!!!!!!!!!!!!!! (6 Replies)
Discussion started by: aajan
6 Replies