10 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
Dear all,
I have >5000 files in newick tree format (which generally used for representing phylogenetic relationships) something like below.
... (3 Replies)
Discussion started by: ashmit99
3 Replies
2. UNIX for Dummies Questions & Answers
Hi Everybody! First post! Totally noobie.
I'm using the terminal to read a poorly formatted book.
The text file contains, in the middle of paragraphs, hyphenation to split words that are supposed to be on multiple pages. It looks ve -- ry much like this.
I was hoping to use grep -v " -- "... (5 Replies)
Discussion started by: AxeHandle
5 Replies
3. UNIX for Dummies Questions & Answers
Hi,
My apologies if my query is already available on this forum but I am new and could not find.
I need a script to list all directories/sub directories and files with permissions/groups/owners. The script would run from home directory and should capture every directory. How do I do this?
... (4 Replies)
Discussion started by: 8709711
4 Replies
4. Shell Programming and Scripting
I have to remove sequences from a file based on the distance value. I am attaching the file containing the distances (Distance.xls)
The second file looks something like this:
Sequences.txt
>Sample1 Freq 59
ggatatgatgatgaactggt
>Sample1 Freq 54
ggatatgatgttgaactggt
>Sample1 Freq 44... (2 Replies)
Discussion started by: Xterra
2 Replies
5. Shell Programming and Scripting
Hello i am trying to remove the html format from the file using sed. for example remove <p> </p>
i tried to do this : sed -e 's/<*>//g' test > test.t
but still i have some html format . please help if you have any suggestions
lets say this is the html file
1... (11 Replies)
Discussion started by: koricha
11 Replies
6. Shell Programming and Scripting
Hello to all,
I am very new in the shell scripting and I need help. I have data for several individuals in several rows followed by a tag and by 5 values per row, with the name of the individual in the first column, e.g.:
IND1 H1 12 13 12 15 14
IND2 H2 12 12 15 14 14
IND3 H1 12 15... (2 Replies)
Discussion started by: Bemar
2 Replies
7. Shell Programming and Scripting
Hi:)
I have two separate data files (.xyz) type and I want to see distances between the coordinates of atoms of the two files. For example:-
My first files contains
1 1 1 11.50910000 5.17730000 16.49360000
3 1 2 11.21790000 6.36062000 15.60660000
6 1 2 ... (4 Replies)
Discussion started by: ananyob
4 Replies
8. Shell Programming and Scripting
how to draw a process tree if i know my process id
and how can i identify session leaders (1 Reply)
Discussion started by: annapurna konga
1 Replies
9. Shell Programming and Scripting
Hi all,
The following is a script for displaying directory tree.
D=${1:-`pwd`}
(cd $D; pwd)
find $D -type d -print | sort |
sed -e "s,^$D,,"\
-e "/^$/d"\
-e "s,*/\(*\)$,\:-----\1,"\
-e "s,*/,: ,g" | more
exit 0
I am trying to understand the above script.But... (3 Replies)
Discussion started by: ravi raj kumar
3 Replies
10. Programming
hi i have modified a program to display directory entries recursively in a tree like form
i need an output with the following guidelines:
the prog displays the contents of the directory
the directory contents are sorted before printing so that directories come before regular files
if an entry... (2 Replies)
Discussion started by: anything2
2 Replies