10 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
Hi,
i've got the following output file:
170724_1600 | SYSTEM | 449 | 282 | 167 | 62
170724_1600 | CCS_SCP_DATA | 200 | 88 | 112 | 44
170724_1600 | CCS_SCP_SUBS_I | 2001 | 1751 | 250 | 87
170724_1600 | UIS_CDR_INDEX | 2001 | 1 | 2000 | 0
170724_1600 | LCP_INDEX | 200 | 5 | 195 | 2... (4 Replies)
Discussion started by: nms
4 Replies
2. UNIX for Dummies Questions & Answers
Hi,
I have an input file that looks like this (columns are tab delimited:
Data000005-RA GO:0003735 GO:0005840 GO:0006412
Data000005-RA GO:0003735
Data000009-RA GO:0003735 GO:0005622 GO:0005840 GO:0006412 ... (2 Replies)
Discussion started by: Fahmida
2 Replies
3. Shell Programming and Scripting
Dear ALL,
I would really appreciate if you could help me in reformatting a file in this way:
The file refers to a list of genetic coordinates, each lines has a score value and the associated chromosome is listed in the line starting with chrom .
If more coordinates are found, the start... (2 Replies)
Discussion started by: paolo.kunder
2 Replies
4. Shell Programming and Scripting
I need help reformatting an input file with spaces in the time field (4th field). I want the field to look like “hh:mm” with appropriate embedded zeros, but instead it has “h :m “ if the hour and/or minute are single character.
I'm pretty new to scripting and this is beyond me. Any help would... (4 Replies)
Discussion started by: lisep
4 Replies
5. Shell Programming and Scripting
Hi,
Input
7488 7389 chr1.fa chr1.fa
3546 9887 chr5.fa chr9.fa
7387 7898 chrX.fa chr3.fa
7488 7389 chr21.fa chr3.fa
7488 7389 chr1.fa chr1.fa
3546 9887 chr9.fa chr5.fa
7898 7387 chrX.fa chr3.fa
Desired Output
7488 7389 chr1.fa chr1.fa 2
3546 9887 chr5.fa chr9.fa 2... (2 Replies)
Discussion started by: jacobs.smith
2 Replies
6. Shell Programming and Scripting
Dear experts,
my problem is pretty tricky.
I want to change a file (see attached input.txt), according to another file (help.txt). The output that is desired is in output.txt. The example is attached.
Note that
-dashes should not be treated specially, they are considered normal characters,... (2 Replies)
Discussion started by: TheTransporter
2 Replies
7. Shell Programming and Scripting
Hi all,
I have an input file like
1,date,company,,
1,date,comapny,,
2,000,,,567,ACT,00,,,,KKG,M1,D45,,67J,+4500000000
2,000,,,567,ACT,00,,,,KKG,M6,D49,,56J,+6000
2,000,,,567,ACT,00,,7,,KKG,M3,D58,,68h,-70000
2,000,,,567,ACT,00,,,,KKG,M9,D95,,34m,0.00
3,total
what i require is
1.I... (2 Replies)
Discussion started by: selvankj
2 Replies
8. Shell Programming and Scripting
I have some xml files that cannot be read using a standard parser, or I am using the wrong parser. The issues seems to be spaces in some of the tags.
Here is a sample,<UgUn 2 >
<Un>
-0.426753
</Un>
</UgUn>The parser isn't able to find the number 2, so that information is lost, etc. It seems... (16 Replies)
Discussion started by: LMHmedchem
16 Replies
9. Shell Programming and Scripting
Dear AWK Users,
I have a data set that is so large (Gigabytes) that it cannot be opened in the vi editor in its entirety. But I can manipulate the entire thing in AWK. It is formatted in a regular manner such that it has the variable descriptions or listings preceeding the variables. The latter... (13 Replies)
Discussion started by: sda_rr
13 Replies
10. UNIX for Dummies Questions & Answers
Hi,
How can I reformat a file (text file) using unix command.
This file was FTP'd from Mainframe and contains some garbage character at the end of each line.
Each line contains special characters '<soh>' at the end which should have been spaces when I view it in emacs or nedit. I couldnt do find... (2 Replies)
Discussion started by: mrjunsy
2 Replies