10 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
Hello,
I have two network edgelists with first two columns as nodes and the last column pearson correlation coefficient (PCC). I want to remove the edges from net1 whose edges are common with net2 && (PCC)net2>=(PCC)net1
net1.txt
A B 0.6
A C 0.7
B C 0.7
D C ... (1 Reply)
Discussion started by: Sanchari
1 Replies
2. Shell Programming and Scripting
Hi everyone.
I have a list of files like:
file001
file002
file003
.
.
.
.
file385
file386
file387
There are more files than above, but I hope you understand what I'm trying to do here.
Is there a way I can create a loop to compare:
file001 with file385
file002 with file386 (9 Replies)
Discussion started by: craigsky
9 Replies
3. UNIX for Dummies Questions & Answers
Hello all- New to this forum, and relatively new to using grep at the Terminal command line to work with regular expressions. I've got a background in math and some programming experience, so it's not been too difficult to learn the basics of searching through my word lists for particular types of... (13 Replies)
Discussion started by: dtalvacchio
13 Replies
4. UNIX for Dummies Questions & Answers
Hi
How can I extract sequences from a fasta file with respect a certain criteria? The beginning of my file (containing in total more than 1000 sequences) looks like this:
>H8V34IS02I59VP
SDACNDLTIALLQIAREVRVCNPTFSFRWHPQVKDEVMRECFDCIRQGLG
YPSMRNDPILIANCMNWHGHPLEEARQWVHQACMSPCPSTKHGFQPFRMA... (6 Replies)
Discussion started by: Marion MPI
6 Replies
5. Shell Programming and Scripting
cat file1
a b c d e f
this is what is in my script
foreach i (`cat file1`)
foreach j (`cat file1`)
#do something here
end
end
basically i want to compare ab, ac, ad, ae, af, ba, bc, bd, be....
and also skipping aa,bb if possible..
if that anyway for me to just use 1 foreach? (2 Replies)
Discussion started by: ctphua
2 Replies
6. Shell Programming and Scripting
Hi All,
I have a list of files and want to find the difference between each file if there is difference then i want the file name to be printed and log the duplicate files
For example
Size Filename
23 a1
23 a2
23 a3
45 a4
If i diff a1 and a2 and find... (3 Replies)
Discussion started by: wedng.bell
3 Replies
7. Shell Programming and Scripting
Hi
*
I have two text files which has the file size, timestamp and the file name. I need to compare these two files and get the differences in the output format. Can anyone help me out with this.
*
cat file1.txt
*474742 Apr 18* 2010 sample.log
*135098 Apr 18* 2010 Testfile
134282 Apr 18* 2010... (7 Replies)
Discussion started by: Sendhil.Kumaran
7 Replies
8. Shell Programming and Scripting
Hi,
I have tab separated list:
KB0005 1019 T IFVATVPVI 0.691 PKC YES
KB0005 1036 T YFLQTSQQL 0.785 PKC YES
KB0005 1037 S FLQTSQQLK 0.585 DNAPK YES
KB0005 508 S ENIISGVSY 0.507 cdc2 YES
KB0005 511 S ... (1 Reply)
Discussion started by: karla
1 Replies
9. UNIX for Advanced & Expert Users
Hello guys,
I have a file in the following format(each line seperated by TAB):
=========
Filename id
Filename id1
Filename id
Filename1 id7
Filename1 id7
Filename2 id1
Filename2 id1
Filename2 id3
Filename3 id2
Filename3 id4
Filename3 id4
Filename3 id6
=========
I would like to... (2 Replies)
Discussion started by: jingi1234
2 Replies
10. UNIX for Dummies Questions & Answers
I have a list of files that I want to compare to another list of files, how do I do that?
The first list will be my known list and hard coded, for example:
mylist="janfile.tar jarfile.jar jan.rpt.Z" etc.
The second list will be found by doing an 'ls' piped to a file:
ls > filelist.dat
... (4 Replies)
Discussion started by: giannicello
4 Replies