10 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
Hi. I've tried several different programs to try and solve this problem, but none of them seem to have done exactly what I want (and I need the file in a very specific format). I have a large file of DNA sequences in a multifasta file like this, with around 15 000 genes:
... (2 Replies)
Discussion started by: 4galaxy7
2 Replies
2. Shell Programming and Scripting
Hi Gurus,
Escape sequences \n, \t, \b, \t, \033(1m are not working.
I just practiced these escape sequences. It worked first. Later its not working.
Also the command - echo inside the script editor shows as shaded by a color. Before that echo inside the script editor wont show like this.... (4 Replies)
Discussion started by: GaneshAnanth
4 Replies
3. AIX
Hello All
I have a system running AIX 61 shared uncapped partition (with 11 physical processors, 24 Virtual 72GB of Memory) .
The output from NMON, vmstat show a high run queue (60+) for continous periods of time intervals, but NO paging, relatively low I/o (6000) , CPU % is 40, Low network.... (9 Replies)
Discussion started by: IL-Malti
9 Replies
4. Shell Programming and Scripting
Hai,
How to remove the repeated 'Chr's in different sequences. In the given example, Chr19 is repeated in two samples
with the same number i.e. +52245923. How to remove one of the entry in any of the samples and to give the range for each
Chr which is -20 for minimum range value and +120 for... (1 Reply)
Discussion started by: hravisankar
1 Replies
5. Shell Programming and Scripting
This is what I would like to accomplish, I have an input file (file A) that consist of thousands of sequence elements with the same number of characters (length), each headed by a free text header starting with the chevron ‘>' character followed by the ID (all different IDs with different lenghts)... (9 Replies)
Discussion started by: Xterra
9 Replies
6. Shell Programming and Scripting
My file looks like this
But I need to remove the entry with the identifier >Reference1 along with the entire sequence. Thus, I will end up having the following file
Thanks in advance! (2 Replies)
Discussion started by: Xterra
2 Replies
7. Shell Programming and Scripting
My file looks like this:
But I would like to 'trim' all sequences to the same lenght 32 characters, keeping intact all the identifier (>GHXCZCC01AJ8CJ)
Would it be possible to use awk to perform this task? (2 Replies)
Discussion started by: Xterra
2 Replies
8. Programming
Hi,
i have read trigraph sequence in
The C99 Draft (N869, 18 January, 1999)
printf("Eh???/n");
will produce
printf("Eh?\n");
what does that mean?
i tried that but i am getting the same output i.e
Eh???/n.
what actually these tri graph characters are?
any idea why ,when and... (1 Reply)
Discussion started by: MrUser
1 Replies
9. UNIX for Advanced & Expert Users
Hello,
I have come across the necessity for me to deal with binary sequences and I had a few questions.
1- Does any UNIX scripting language provide any tool or command for converting text data to binary sequences? Example of binary sequence: "0x97 0x93 0x85 0x40 0xd5 0xd6 0xd7"
2- If I want... (2 Replies)
Discussion started by: Indalecio
2 Replies
10. Solaris
:) Hi,
Can any one help me to find available escape sequences in UNIX shell programming? ( Like \n, \c etc,. in C or C++)
Iam generating one report using one of the script, in that it is very much essential.
Regards,
LOVE (6 Replies)
Discussion started by: Love
6 Replies