10 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
Hey guys,
I have wrote the following script to apply a module named "trinity" on my files. (it takes two input files and spit a trinity.fasta as output)
#!/bin/bash -l
#SBATCH -p node
#SBATCH -A <projectID>
#SBATCH -n 16
#SBATCH -t 7-00:00:00
#SBATCH --mem=128GB
#SBATCH --mail-type=ALL... (1 Reply)
Discussion started by: @man
1 Replies
2. Shell Programming and Scripting
Hi experts,
I am using KSH and I am need to display file with number in front of file names and user can select it by entering the number.
I am trying to use following command to display list with numbers. but I do not know how to capture number and identify what file it is to be used for... (5 Replies)
Discussion started by: mysocks
5 Replies
3. Shell Programming and Scripting
Hi all,
I have a many folders with zipped files in them. The zipped files are txt files from different folders. The txt files have the same names. If i try to
find . -type f -name "*.zip" -exec cp -R {} /myhome/ZIP \; it fails since the ZIP files from different folders have the same names and... (2 Replies)
Discussion started by: pmkenya
2 Replies
4. Shell Programming and Scripting
Hi!
I just want to count number of files in a directory, and write to new text file, with number of files and their name
output should look like this,,
assume that below one is a new file created by script
Number of files in directory = 25
1. a.txt
2. abc.txt
3. asd.dat... (20 Replies)
Discussion started by: Akshay Hegde
20 Replies
5. UNIX for Dummies Questions & Answers
Hi,
I have a large number of subdirectories (>200), and in each of these directories there is a file with a name like "opp1234.dat".
I'd like to know how I could change the names of these files to say "out.dat" in all these subdirectories in one go.
Thanks! (5 Replies)
Discussion started by: lost.identity
5 Replies
6. UNIX for Dummies Questions & Answers
I have various .sh and .pl files in one directory. I want to rename all the .sh files to .pl
i.e testscript.sh --> testscript.pl
I am trying to use mv *.sh *.pl
It doesnt work though!! (3 Replies)
Discussion started by: chrisjones
3 Replies
7. Shell Programming and Scripting
Hi,
I'm not very experienced in shell scripting and that's probably why I came across the following problem:
I do have several hundred pairs of text files (PF00x.spl and PF00x.shd) where the first file (PF00x.spl) needs to be renamed according a string that is included in the second file... (12 Replies)
Discussion started by: inCH
12 Replies
8. Shell Programming and Scripting
hey all,
I have files in the format of
ABCD20061101
and
ABCDEF20061101
in one directory, I would like to change all ABCD20061101 to ABCDEF20061101 and the problem is if I do a simple pattern match of ABCD, then those ABCDEF20061101 would also... (2 Replies)
Discussion started by: mpang_
2 Replies
9. UNIX for Dummies Questions & Answers
Hi all,
I'm trying to rename a directory of html-files:
index.php?page=start
should become
start.html
I've lost track of all the pipes and brackets and decided I need some help ;-)
Many thanks. (4 Replies)
Discussion started by: TylerDurden
4 Replies
10. UNIX for Dummies Questions & Answers
:confused: How can i rename a file 'x.log' to 'x_20020512 072909.log'
:eek: i'm using perl, with system command from a unix web server, and need to timestamp my logs if the above format (filename _ year month day hr min sec .log) (9 Replies)
Discussion started by: CompuTelSystem
9 Replies