10 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
I have wrote the following script to apply a module named "trinity" on my files. (it takes two input files and spit a trinity.fasta as output)
#SBATCH -p node
#SBATCH -A <projectID>
#SBATCH -n 16
#SBATCH -t 7-00:00:00
#SBATCH --mail-type=ALL... (1 Reply)
Discussion started by: @man
2. Shell Programming and Scripting
My requirement is I have a zip file with name say eg: test_ABC_UH_ccde2a_awdeaea_20150422.zip
within that there are subdirectories on each directory we again have .zip files and in that we have files like mama20150422.gz and so on.
Iam in need of a bash script so that it unzips... (0 Replies)
Discussion started by: Ravi Kishore
3. Shell Programming and Scripting
We have some shell scripts which Internally uses Perl Script to Unzip the source zip files which comes to inbound directory. So now our requirement is to avoid the dependency on Perl Script and us Shell Script to unzip the files. I have the Perl script with me attached can some one... (3 Replies)
Discussion started by: naveen.dasu
4. Shell Programming and Scripting
I need help in writing a batch script.
I have 100 zip files in a folder. Each zip file has a unique name starting with XYZ_12345.zip Each zip file contains single csv file
I would like to batch extract the files and also rename the extracted csv as per the original zip name... (6 Replies)
Discussion started by: rajlakshmi
5. Shell Programming and Scripting
I have a folder (C:\shellprg\input\) containing .CSV, .zip, .gz files.
1] I want to find all .zip/.gz files from folder (C:\shellprg\input\).
2] unzip/uncompress files into the same folder (C:\shellprg\input\) through shell script.
I am using below commands for unzip files,
unzip <filename>... (2 Replies)
Discussion started by: Poonamol
6. Shell Programming and Scripting
We have a folder named 'Inbound Files' that has many folders in it containing source files that have to be processed by Informatica system. We have zipped files, text files and csv files in those folders that have to be moved (cut and paste) from 'Inbound_Files' folder to... (3 Replies)
Discussion started by: haralebp
7. UNIX for Dummies Questions & Answers
Variations of multiple renames seems to come up a lot but i can't find the answer to this situation.
Tidying up a directory where people rename files to .working, .bob, .attempt1 & so on.
what i am trying to do is: list the file type, & rename from ".whatever" to .fixed.
As the ".whatever" is... (5 Replies)
Discussion started by: woodstock
8. Shell Programming and Scripting
As part of an audit at work I need to review a lot of Windows workstations. One thing I need to do is review all of the .doc files. My problem is that I guessed a number of these files would be in zip archives. This is the case but they are mixed in with a lot of other file types that I am not... (1 Reply)
Discussion started by: stumpyuk
9. Shell Programming and Scripting
I run Solaris 9. I have a below script which is used for gunzip the thousand files from a directory.
for i in `ls -1`
gunzip -c $i > /path/to/file/$i
In my SAME directory there thousand of GZIP file and also... (4 Replies)
Discussion started by: thepurple
10. Shell Programming and Scripting
I'm getting the following errors when I try to write a script to unzip some zip files. When I use the free trial copy of the commerical winzip program, however, they work fine. When I use -l or -t on unzip it indicates no errors. When I use the -o switch interactively from the bash command line it... (1 Reply)
Discussion started by: siegfried