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Forum: Shell Programming and Scripting 12-26-2013

Extract the part of sequences from a file

5,655

Posted By

Thank you for your answer. I corrected the code....

Thank you for your answer. I corrected the code. But the first character of each sequence is not printing. I got the output like this
>P02649:3-23
LWAALLVTFLAGCQAKVEQA
>P02649:130-162...

Forum: Shell Programming and Scripting 12-26-2013

Extract the part of sequences from a file

5,655

Posted By

Thank you for your answer. I corrected the code....

Thank you for your answer. I corrected the code. But the first character of each sequence is not printing. I got the output like this
>P02649:3-23
LWAALLVTFLAGCQAKVEQA
>P02649:130-162...

Forum: Shell Programming and Scripting 12-26-2013

Extract the part of sequences from a file

5,655

Posted By

Extract the part of sequences from a file

I have a text file, input.fasta contains some protein sequences. input.fasta is shown below.

>P02649
MKVLWAALLVTFLAGCQAKVEQAVETEPEPELRQQTEWQSGQRWELALGRFWDYLRWVQT...

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