vbbatch(1) The VoxBo Manual vbbatch(1)NAME
vbbatch - run a command line multiple times with variable substitution
SYNOPSIS
vbbatch <flag> ...
DESCRIPTION
vbbatch is part of the VoxBo suite of tools for brain image analysis.
vbbatch allows you to run a command multiple times with some variable substitutions (typically replacing the token FILE with each of a set
of filenames). The commands are then run in parallel. If a VoxBo cluster is detected, the jobs will be submitted to the cluster.
OPTIONS EXAMPLES
To run myscript.sh on all your subjects' Anatomy directories:
vbbatch -c "myscript.sh FILE" study*/sub*/Anatomy -r
To run myperms.sh 1000 times at low priority, with different output files:
vbbatch -c "myperms.sh results_IND.nii.gz" -d 1000 -r -p xnice
AVAILABILITY
Pre-built VoxBo binaries are available for Linux, OSX, and Cygwin, and via the NeuroDebian project (neuro.debian.net) for Debian deriva-
tives.
CAVEATS
VoxBo is provided with no warranty whatsoever.
AUTHOR
For an historical roster of the VoxBo development team, visit www.voxbo.org.
SEE ALSO
For detailed help on any VoxBo command-line program, run it with no arguments. For graphical programs, use the -h flag. For more help
with VoxBo, for information about the mailing list, or to report bugs, visit the web site at www.voxbo.org.
For information about file format support in VoxBo, see voxbo-fileformats(7). For general information about VoxBo, see voxbo(7).
VoxBo January, 2011 (v1.8.5) vbbatch(1)
Check Out this Related Man Page
dicominfo(1) The VoxBo Manual dicominfo(1)NAME
dicominfo - dump DICOM header information
SYNOPSIS
dicominfo <file> ...
DESCRIPTION
dicominfo is part of the VoxBo suite of tools for brain image analysis.
dicominfo dumps to the terminal a single-line representation of all of the elements in a DICOM file (it also works with some older-style
ACR/NEMA files). It does not descend into SQ (sequence) items.
AVAILABILITY
Pre-built VoxBo binaries are available for Linux, OSX, and Cygwin, and via the NeuroDebian project (neuro.debian.net) for Debian deriva-
tives.
CAVEATS
VoxBo is provided with no warranty whatsoever.
AUTHOR
For an historical roster of the VoxBo development team, visit www.voxbo.org.
SEE ALSO
For detailed help on any VoxBo command-line program, run it with no arguments. For graphical programs, use the -h flag. For more help
with VoxBo, for information about the mailing list, or to report bugs, visit the web site at www.voxbo.org.
For information about file format support in VoxBo, see voxbo-fileformats(7). For general information about VoxBo, see voxbo(7). See also
dcmsplit(1).
VoxBo January, 2011 (v1.8.5) dicominfo(1)
hello
whats the difference between excuting a shell script as
a)sh myscript.sh
b). ./myscript.sh
i noticed that my shell script works fine when i run it as . ./myscript
.sh but fails when i run it as sh myscript.sh could anybody explain why.
the shell script is very simple
... (9 Replies)
i want to run a ksh script 'myscript' at the background and direct the system to return any error msg to /tmp/myscript.err and the output of 'myscript' to /tmp/myscript.out
how do i do that at the command prompt? thank you. (3 Replies)
Hello ;
I have a script myscript.sh. If I type at prompt
myscript.sh
I will receive
ksh: myscript.sh: not found
but if I type
./myscript.sh
it works .
What should I do to be able to run myscript just typing
myscript.sh
Many thanks before. (1 Reply)
Hey,
As part of a Master's Degree program in Aeronautical Engineering I need a dedicated Unix PC to run a computational fluid dynamics (CFD) code in Fortran. Each run to model a single flow can take several days or weeks, so optimizing system resources is the only consideration. I need to buy... (1 Reply)
Hi everyone,
I'm very new, I just wrote a script "Hello World" :) LOL
How can I execute the script without the ./myscript.
I want to just type "myscript" basically from anywhere without the " ./ ".
Thanks a bunch,
NinjaX (2 Replies)
Hi everyone,
I've written a script, I gave it permission by
> chmod u+x myscript
and then tried to run it with
> myscript
and it didn't work, so I've written
> ./myscript
again, it didn't work, so I've written
> set path = (. $path)
but it didn't work as well.
I have some... (6 Replies)
Hi,
Let say I have these 3 files (state, list and myscript). I want to be able get the sample output like below when I run myscript. Any one know how to fix the code? TIA.
~~~~~~~~~~~~~~~
> cat /home/state
CA
> cat /home/list
CA 100 50 20
AUS 120 61 10
> cat myscript... (6 Replies)
I have a question about the following
what is the difference between running myscript vs . myscript vs exec myscript ?
I know that when you just run myscript it will fork a child process and run the script and exits.
What does the . myscript and exec myscript do and why is it different and... (1 Reply)
Hi all
I'm new to this forum and I really hope someone can help me out with a (for you guys) fairly easy question.
I want to have a script that takes 1-14 arguments, all numbers 1-14, say
myscript 1 3 4 5 7
what the script shall do is basically generare a textfile that contains 16... (5 Replies)