Linux and UNIX Man Pages

Linux & Unix Commands - Search Man Pages

vbbatch(1) [debian man page]

vbbatch(1)							 The VoxBo Manual							vbbatch(1)

NAME
vbbatch - run a command line multiple times with variable substitution SYNOPSIS
vbbatch <flag> ... DESCRIPTION
vbbatch is part of the VoxBo suite of tools for brain image analysis. vbbatch allows you to run a command multiple times with some variable substitutions (typically replacing the token FILE with each of a set of filenames). The commands are then run in parallel. If a VoxBo cluster is detected, the jobs will be submitted to the cluster. OPTIONS
EXAMPLES
To run myscript.sh on all your subjects' Anatomy directories: vbbatch -c "myscript.sh FILE" study*/sub*/Anatomy -r To run myperms.sh 1000 times at low priority, with different output files: vbbatch -c "myperms.sh results_IND.nii.gz" -d 1000 -r -p xnice AVAILABILITY
Pre-built VoxBo binaries are available for Linux, OSX, and Cygwin, and via the NeuroDebian project (neuro.debian.net) for Debian deriva- tives. CAVEATS
VoxBo is provided with no warranty whatsoever. AUTHOR
For an historical roster of the VoxBo development team, visit www.voxbo.org. SEE ALSO
For detailed help on any VoxBo command-line program, run it with no arguments. For graphical programs, use the -h flag. For more help with VoxBo, for information about the mailing list, or to report bugs, visit the web site at www.voxbo.org. For information about file format support in VoxBo, see voxbo-fileformats(7). For general information about VoxBo, see voxbo(7). VoxBo January, 2011 (v1.8.5) vbbatch(1)

Check Out this Related Man Page

dicominfo(1)							 The VoxBo Manual						      dicominfo(1)

NAME
dicominfo - dump DICOM header information SYNOPSIS
dicominfo <file> ... DESCRIPTION
dicominfo is part of the VoxBo suite of tools for brain image analysis. dicominfo dumps to the terminal a single-line representation of all of the elements in a DICOM file (it also works with some older-style ACR/NEMA files). It does not descend into SQ (sequence) items. AVAILABILITY
Pre-built VoxBo binaries are available for Linux, OSX, and Cygwin, and via the NeuroDebian project (neuro.debian.net) for Debian deriva- tives. CAVEATS
VoxBo is provided with no warranty whatsoever. AUTHOR
For an historical roster of the VoxBo development team, visit www.voxbo.org. SEE ALSO
For detailed help on any VoxBo command-line program, run it with no arguments. For graphical programs, use the -h flag. For more help with VoxBo, for information about the mailing list, or to report bugs, visit the web site at www.voxbo.org. For information about file format support in VoxBo, see voxbo-fileformats(7). For general information about VoxBo, see voxbo(7). See also dcmsplit(1). VoxBo January, 2011 (v1.8.5) dicominfo(1)
Man Page

9 More Discussions You Might Find Interesting

1. Shell Programming and Scripting

any explanation for thsi shell script behaviour

hello whats the difference between excuting a shell script as a)sh myscript.sh b). ./myscript.sh i noticed that my shell script works fine when i run it as . ./myscript .sh but fails when i run it as sh myscript.sh could anybody explain why. the shell script is very simple ... (9 Replies)
Discussion started by: xiamin
9 Replies

2. Shell Programming and Scripting

divert output

i want to run a ksh script 'myscript' at the background and direct the system to return any error msg to /tmp/myscript.err and the output of 'myscript' to /tmp/myscript.out how do i do that at the command prompt? thank you. (3 Replies)
Discussion started by: kanang
3 Replies

3. Shell Programming and Scripting

executing script

Hello ; I have a script myscript.sh. If I type at prompt myscript.sh I will receive ksh: myscript.sh: not found but if I type ./myscript.sh it works . What should I do to be able to run myscript just typing myscript.sh Many thanks before. (1 Reply)
Discussion started by: big123456
1 Replies

4. UNIX for Dummies Questions & Answers

Help me spend $1000

Hey, As part of a Master's Degree program in Aeronautical Engineering I need a dedicated Unix PC to run a computational fluid dynamics (CFD) code in Fortran. Each run to model a single flow can take several days or weeks, so optimizing system resources is the only consideration. I need to buy... (1 Reply)
Discussion started by: John Bruzzese
1 Replies

5. UNIX for Dummies Questions & Answers

run script without ./scriptname

Hi everyone, I'm very new, I just wrote a script "Hello World" :) LOL How can I execute the script without the ./myscript. I want to just type "myscript" basically from anywhere without the " ./ ". Thanks a bunch, NinjaX (2 Replies)
Discussion started by: NinjaXman
2 Replies

6. UNIX for Dummies Questions & Answers

Script doesn't run

Hi everyone, I've written a script, I gave it permission by > chmod u+x myscript and then tried to run it with > myscript and it didn't work, so I've written > ./myscript again, it didn't work, so I've written > set path = (. $path) but it didn't work as well. I have some... (6 Replies)
Discussion started by: shira
6 Replies

7. Shell Programming and Scripting

How to put output of one command into a variable

Hi, Let say I have these 3 files (state, list and myscript). I want to be able get the sample output like below when I run myscript. Any one know how to fix the code? TIA. ~~~~~~~~~~~~~~~ > cat /home/state CA > cat /home/list CA 100 50 20 AUS 120 61 10 > cat myscript... (6 Replies)
Discussion started by: joker_789us
6 Replies

8. Shell Programming and Scripting

forking question myscript vs . myscript vs exec myscript

I have a question about the following what is the difference between running myscript vs . myscript vs exec myscript ? I know that when you just run myscript it will fork a child process and run the script and exits. What does the . myscript and exec myscript do and why is it different and... (1 Reply)
Discussion started by: jlim0930
1 Replies

9. UNIX for Dummies Questions & Answers

Creating textfile from arguments

Hi all I'm new to this forum and I really hope someone can help me out with a (for you guys) fairly easy question. I want to have a script that takes 1-14 arguments, all numbers 1-14, say myscript 1 3 4 5 7 what the script shall do is basically generare a textfile that contains 16... (5 Replies)
Discussion started by: Tobbev
5 Replies