02-02-2006
this would give you the symbolic link /users/test/hist -> /users/hist
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LEARN ABOUT DEBIAN
bio::tools::eutilities::historyi
Bio::Tools::EUtilities::HistoryI(3pm) User Contributed Perl Documentation Bio::Tools::EUtilities::HistoryI(3pm)
NAME
Bio::Tools::EUtilities::HistoryI - simple extension of EUtilDataI interface class for classes which hold NCBI server history data
SYNOPSIS
#should work for any class which is-a HistoryI
if ($obj->has_History) {
# do something here
}
($webenv, $querykey) = $obj->history;
$obj->history($webenv, $querykey);
$webenv = $obj->get_webenv;
$query_key = $obj->get_query_key;
DESCRIPTION
This class extends methods for any EUtilDataI implementation allow instances to dealwith NCBI history data (WebEnv and query_key). These
can be used as parameters for further queries against data sets stored on the NCBI server, much like NCBI's Entrez search history. These
are important when one wants to run complex queries using esearch, retrieve related data using elink, and retrieve large datasets using
epost/efetch.
The simplest implementation is Bio::Tools::EUtilities::History, which holds the history data for epost. See also
Bio::Tools::EUtilities::Query (esearch) and Bio::Tools::EUtilities::LinkSet (elink), which also implement HistoryI.
FEEDBACK
Mailing Lists
User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to one
of the Bioperl mailing lists. Your participation is much appreciated.
bioperl-l@lists.open-bio.org - General discussion
http://www.bioperl.org/wiki/Mailing_lists - About the mailing lists
Support
Please direct usage questions or support issues to the mailing list:
bioperl-l@bioperl.org
rather than to the module maintainer directly. Many experienced and reponsive experts will be able look at the problem and quickly address
it. Please include a thorough description of the problem with code and data examples if at all possible.
Reporting Bugs
Report bugs to the Bioperl bug tracking system to help us keep track the bugs and their resolution. Bug reports can be submitted via the
web.
https://redmine.open-bio.org/projects/bioperl/
AUTHOR
Email cjfields at bioperl dot org
APPENDIX
The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _
history
Title : history
Usage : my ($webenv, $qk) = $hist->history
Function : Get/Set two-element list of webenv() and query_key()
Returns : array
Args : two-element list of webenv, querykey
get_webenv
Title : get_webenv
Usage : my $webenv = $hist->get_webenv
Function : returns web environment key needed to retrieve results from
NCBI server
Returns : string (encoded key)
Args : none
get_query_key
Title : get_query_key
Usage : my $qk = $hist->get_query_key
Function : returns query key (integer) for the history number for this session
Returns : integer
Args : none
perl v5.14.2 2012-03-02 Bio::Tools::EUtilities::HistoryI(3pm)