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Full Discussion: error in awk script
Top Forums Shell Programming and Scripting error in awk script Post 52007 by rraajjiibb on Tuesday 8th of June 2004 01:20:29 AM
Old 06-08-2004
I think my previous post did not receive any reply as it needs more clarification...

My input file looks as attcahed

=======================================================================
Record: 24950188 Version: 2 Timestamp: Mon Jun 7 15:00:06 2004
Primary (Reporting) Cell: 30 Sector: 3 Carrier: 1 Ref: yes Event: 46988
Missing Pilot: Keep: 1 PN-Phase: 0x0191 Strength: 25
Secondary Sector Information:
Slot 1: Keep: 1 Pn_offset: 72 Strength: 26 Ref: no
=======================================================================
Record: 24950189 Version: 2 Timestamp: Mon Jun 7 15:00:06 2004
Primary (Reporting) Cell: 30 Sector: 3 Carrier: 2 Ref: no Event: 46989
Missing Pilot: Keep: 1 PN-Phase: 0x7456 Strength: 26
Secondary Sector Information:
Slot 1: Keep: 1 Pn_offset: 357 Strength: 28 Ref: yes
Slot 2: Keep: 1 Pn_offset: 393 Strength: 29 Ref: no
=======================================================================
Record: 24950190 Version: 2 Timestamp: Mon Jun 7 15:00:06 2004
Primary (Reporting) Cell: 30 Sector: 3 Carrier: 2 Ref: no Event: 46990
Missing Pilot: Keep: 1 PN-Phase: 0x7456 Strength: 25
Secondary Sector Information:
Slot 1: Keep: 1 Pn_offset: 357 Strength: 27 Ref: yes
Slot 2: Keep: 1 Pn_offset: 393 Strength: 30 Ref: no
=======================================================================
Record: 24950191 Version: 2 Timestamp: Mon Jun 7 15:00:06 2004
Primary (Reporting) Cell: 30 Sector: 3 Carrier: 2 Ref: no Event: 46991
Missing Pilot: Keep: 1 PN-Phase: 0x7456 Strength: 22
Secondary Sector Information:
Slot 1: Keep: 1 Pn_offset: 357 Strength: 27 Ref: yes
Slot 2: Keep: 1 Pn_offset: 393 Strength: 32 Ref: no
=======================================================================
...........................
what my code is attempting to do is.....

If in the second line of every record the Ref:no is set then i need to pick up the Pn_offset: value for the next line where Ref: yes is set.

Ref:no Ref:yes Pn_offset:



Now it 's alittle bit more clear i hope.....
 

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Bio::Biblio::Ref(3pm)					User Contributed Perl Documentation				     Bio::Biblio::Ref(3pm)

NAME
Bio::Biblio::Ref - Representation of a bibliographic reference SYNOPSIS
$obj = Bio::Biblio::Ref->new(-type => 'Letter', -title => 'Onegin to Tatiana'); #--- OR --- $obj = Bio::Biblio::Ref->new(); $obj->type ('Letter'); DESCRIPTION
A storage object for a general bibliographic reference (a citation). See its place in the class hierarchy in http://www.ebi.ac.uk/~senger/openbqs/images/bibobjects_perl.gif Attributes The following attributes are specific to this class, and they are inherited by all citation types. author_list_complete values: 'Y' (default) or 'N' authors type: array ref of Bio::Biblio::Provider's cross_references type: array ref of Bio::Annotation::DBLink's cross_references_list_complete values: 'Y' (default) or 'N' abstract abstract_language abstract_type codes type: hash ref contributors type: array ref of Bio::Biblio::Provider's date date_completed date_created date_revised format identifier keywords language last_modified_date publisher type: Bio::Biblio::Provider repository_subset rights spatial_location subject_headings type: hash ref subject_headings_source temporal_period title toc toc_type type SEE ALSO
o OpenBQS home page: http://www.ebi.ac.uk/~senger/openbqs/ o Comments to the Perl client: http://www.ebi.ac.uk/~senger/openbqs/Client_perl.html FEEDBACK
Mailing Lists User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the Bioperl mailing list. Your participation is much appreciated. bioperl-l@bioperl.org - General discussion http://bioperl.org/wiki/Mailing_lists - About the mailing lists Support Please direct usage questions or support issues to the mailing list: bioperl-l@bioperl.org rather than to the module maintainer directly. Many experienced and reponsive experts will be able look at the problem and quickly address it. Please include a thorough description of the problem with code and data examples if at all possible. Reporting Bugs Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via the web: https://redmine.open-bio.org/projects/bioperl/ AUTHORS
Heikki Lehvaslaiho (heikki-at-bioperl-dot-org), Martin Senger (senger@ebi.ac.uk) COPYRIGHT
Copyright (c) 2002 European Bioinformatics Institute. All Rights Reserved. This module is free software; you can redistribute it and/or modify it under the same terms as Perl itself. DISCLAIMER
This software is provided "as is" without warranty of any kind. APPENDIX
The rest of the documentation details each of the object methods. Internal methods are preceded with a _ add_cross_reference Usage : $self->add_cross_reference (Bio::Annotation::DBLink->new(-database => 'EMBL', -primary_id => 'V00808'); Function: adding a link to a database entry Returns : new value of 'cross_references' Args : an object of type Bio::Annotation::DBLink add_author Usage : $self->add_author (Bio::Biblio::Person->new(-lastname => 'Novak'); Function: adding an author to a list of authors Returns : new value of 'authors' (a full list) Args : an object of type Bio::Biblio::Provider add_contributor Usage : $self->add_contributor (Bio::Biblio::Person->new(-lastname => 'Novak'); Function: adding a contributor to a list of contributors Returns : new value of 'contributors' (a full list) Args : an object of type Bio::Biblio::Provider perl v5.14.2 2012-03-02 Bio::Biblio::Ref(3pm)
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