Sponsored Content
Top Forums UNIX for Beginners Questions & Answers Is it possible to rename fasta headers based on its position specified in another file? Post 303041048 by RudiC on Wednesday 13th of November 2019 02:37:19 AM
Old 11-13-2019
Any attempts / ideas / thoughts from your side? Applying what you learned in here?
 

10 More Discussions You Might Find Interesting

1. Shell Programming and Scripting

Merging of files with different headers to make combined headers file

Hi , I have a typical situation. I have 4 files and with different headers (number of headers is varible ). I need to make such a merged file which will have headers combined from all files (comman coluns should appear once only). For example - File 1 H1|H2|H3|H4 11|12|13|14 21|22|23|23... (1 Reply)
Discussion started by: marut_ashu
1 Replies

2. UNIX for Dummies Questions & Answers

To Extract words from File based on Position

Hi Guys, While I was writing one shell script , I just got struck at this point. I need to extract words from a file at some specified position and do some comparison operation and need to replace the extracted word with another word. Eg : I like Orange very much. I need to replace... (19 Replies)
Discussion started by: kuttu123
19 Replies

3. UNIX for Dummies Questions & Answers

Script to delete a word based on position in a file

Hi, I am new to unix. I want to delete 2 words placed at position say for example at 23rd and 45th position in a line. I used sed but couldnt achieve this. Example: the file contains 2 lines 12345 98765 "12345" 876 12345 98765 "64578" 876 I want to delete " placed at position 13 and 19... (4 Replies)
Discussion started by: nbks2u
4 Replies

4. Shell Programming and Scripting

Replacing headers based on a second file

I have a file with thousands of sequences that looks like this: I need to replace the headers using a second file Thus, I will end up having the following file: I am looking for an AWK script that I can easily plug in my current pipeline. Any help will be greatly appreciated! (6 Replies)
Discussion started by: Xterra
6 Replies

5. UNIX for Dummies Questions & Answers

extract regions of file based on start and end position

Hi, I have a file1 of many long sequences, each preceded by a unique header line. file2 is 3-columns list: headers name, start position, end position. I'd like to extract the sequence region of file1 specified in file2. Based on a post elsewhere, I found the code: awk... (2 Replies)
Discussion started by: pathunkathunk
2 Replies

6. Shell Programming and Scripting

Fixed width file search based on position value

Hi, I am unable to find the right option to extract the data in the fixed width file. sample data abcd1234xgyhsyshijfkfk hujk9876 io xgla loki8787eljuwoejroiweo dkfj9098 dja Search based on position 8-9="xg" and print the entire row output ... (4 Replies)
Discussion started by: onesuri
4 Replies

7. Shell Programming and Scripting

Split file based on distinct value at specific position

OS : Linux 2.6x Shell : Korn In a single file , how can I identify all the Uniqe values at a specific character position and length of each record , and simultaneously SPLIT the records of the file based on each of these values and write them in seperate files . Lets say : a) I want to... (4 Replies)
Discussion started by: kumarjt
4 Replies

8. Shell Programming and Scripting

Extract sequences from a FASTA file based on another file

I have two files. File1 is shown below. >153L:B|PDBID|CHAIN|SEQUENCE RTDCYGNVNRIDTTGASCKTAKPEGLSYCGVSASKKIAERDLQAMDRYKTIIKKVGEKLCVEPAVIAGIISRESHAGKVL KNGWGDRGNGFGLMQVDKRSHKPQGTWNGEVHITQGTTILINFIKTIQKKFPSWTKDQQLKGGISAYNAGAGNVRSYARM DIGTTHDDYANDVVARAQYYKQHGY >16VP:A|PDBID|CHAIN|SEQUENCE... (7 Replies)
Discussion started by: nelsonfrans
7 Replies

9. UNIX for Dummies Questions & Answers

Append file name to fasta file headers in Linux

How do we append the file name to fasta file headers in multiple fasta-files in Linux? (10 Replies)
Discussion started by: Mauve
10 Replies

10. Shell Programming and Scripting

Search for a string at a particular position and replace with blank based on position

Hi, I have a file with multiple lines(fixed width dat file). I want to search for '02' in the positions 45-46 and if available, in that lines, I need to replace value in position 359 with blank. As I am new to unix, I am not able to figure out how to do this. Can you please help me to achieve... (9 Replies)
Discussion started by: Pradhikshan
9 Replies
AIRSTRIKE(6)							       GAMES							      AIRSTRIKE(6)

	    _	 _	    _	     _ _
	   / 	(_)_ __ ___| |_ _ __(_) | _____
	  / _  | | '__/ __| __| '__| | |/ / _ 
	 / ___ | | |  \__  |_| |  | |   <  __/
	/_/   \_\_|_|  |___/\__|_|  |_|_|\_\___|

NAME
airstrike - 2d dogfight game in the tradition of 'Biplanes' and 'BIP' DESCRIPTION
Airstrike is a 2d biplane dogfight game in the tradition of the Intellivision and Amiga games 'Biplanes' and 'BIP'. It features a robust physics engine and several other extensions of the original games. SYNOPSIS
airstrike [options] OPTIONS
Airstrike reads all the configuration options from a configuration file at startup but you can override from command line a few of the options: --fullscreen Runs the game in fullscreen mode. --sound Runs game with sound effects, if support for that has been compiled in. --nosound Runs the game without sound. --noalpha Game graphics will not be antialiased. This makes it run faster. --alpha Game graphics will be antialiased. --config CONFIGFILE Use given configuration file instead of the one which location is compiled into Airstrike. Configuration file name is '.airstrikerc' and it's located in your home directory. CONTROLS
Airstrike is controlled from keyboard: RIGHT Plane nose goes up. LEFT Plane nose goes down. COMMA Accelerate. DOT Shoot. SPACE Drop a bomb. ESC Pause game and open game options menu. From menu you can change options, view release notes and quit it. LICENCE
This is free software; you can redistribute it and/or modify it under the terms specified in the GNU Public Licence (GPL). WARRANTY
None. COPYRIGHT AND CREDITS
Ulf Ekstrom Game author, programming and graphics Peter Eismann Windows port, comments and ideas Eero Tamminen Sound, graphics, game objects, makefiles, comments and ideas Alessandro Giusti Graphics and ideas And many others for comments, bug reports and ideas. Airstrike Version 1.0 AIRSTRIKE(6)
All times are GMT -4. The time now is 05:05 PM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy