08-15-2018
thanks I've tried that now but I still have the same problem as when using the code from my second post.
With the files containing different numbers as in my first post, I get empty lines as first and last line.
Since my data is not in columns but in one line for file1, and they are a part of a cshell script and come as results in a loop,it would be difficult to be sure that it will never have any extra characters, I would rather keep them as a one line instead of converting to a column.
Is there a way to use indices with lines as with the columns in awk?
10 More Discussions You Might Find Interesting
1. UNIX for Dummies Questions & Answers
Hello all,
I always found help for my problems using the search option, but this time my request is too specific. I have two files that I want to compare. File1 is the index and File2 contains the data:
File1:
chr1 protein_coding exon 500 600 . + . gene_id "20532";... (0 Replies)
Discussion started by: DerSeb
0 Replies
2. Shell Programming and Scripting
Hi guys,
I'm rather new at using UNIX based systems, and when it comes to scripting etc I'm even newer.
I have two files which i need to compare.
file1: (some random ID's)
451245
451288
136588
784522
file2: (random ID's + e-mail assigned to ID)
123888 xc@xc.com
451245 ... (21 Replies)
Discussion started by: spirm8
21 Replies
3. UNIX for Dummies Questions & Answers
I have two text files where the first three columns are exactly the same. I want to compare the fourth column of the text files and if the values are different, print that row into a new output file. How do I go about doing that?
File 1:
100 rs3794811 0.01 0.3434
100 rs8066551 0.01... (8 Replies)
Discussion started by: evelibertine
8 Replies
4. UNIX for Dummies Questions & Answers
Hi,
I have two text files with matching first columns. Some of the values in the second column do not match. I want to write a script to print out the rows (only the first column) where the values in the second column do not match.
Example:
Input 1
A 1
B 2
C 3
D 4
Input 2
A 2
B 2... (6 Replies)
Discussion started by: evelibertine
6 Replies
5. Shell Programming and Scripting
Hi All,
I want to compare two files using shell script. One file will be input file and each line of input file will be compared against the other file.
for e.g.
File 1
10.3.242.170 saquatch Tesr.adc.unix.com jndi_p1 jndi_p1.unix.com
10.3.242.171 ness... (10 Replies)
Discussion started by: sharsour
10 Replies
6. Shell Programming and Scripting
I'm looking to match an error code against a list of possible codes and get the nearest match. The code would be a 6 character hexadecimal string.
I have a file of error codes all of which have a specific first 3 characters, however, after that the last 3 characters may be specific or generic as... (3 Replies)
Discussion started by: dazedandconfuse
3 Replies
7. Shell Programming and Scripting
Hi,
I have been trying to find help with my issue and I'm thinking awk may be able to do it.
I have two files eg
file1.txt
STRING1 230 400 0.36
STRING2 400 230 -0.13
STRING3 130 349 1
file2.txt
CUFFFLINKS 1 1394 93932 . + STRING1
CUFFFLINKS ... (9 Replies)
Discussion started by: zward
9 Replies
8. Shell Programming and Scripting
Hello all, First post here. I did not notice a previous post to help me down the right path. I am looking to compare a column in a CSV file against another file (which is not a column match one for one) but more or less when a match is made, I would like to append a third column that contains a... (17 Replies)
Discussion started by: dis0wned
17 Replies
9. UNIX for Beginners Questions & Answers
I have two file as given below which shows the ACL permissions of each file. I need to compare the source file with target file and list down the difference as specified below in required output. Can someone help me on this ?
Source File
*************
# file: /local/test_1
# owner: own
#... (4 Replies)
Discussion started by: sarathy_a35
4 Replies
10. Shell Programming and Scripting
I have a file with contents as shown in file.texi
Would like to keep only the sections that have inlineifset till the empty line is reached. Finally replace the
following string with a space
@inlineifset{mrg, @opar{@bullet{}
I had written the following command but it messed my file
... (6 Replies)
Discussion started by: Danette
6 Replies
LEARN ABOUT OPENSOLARIS
comm
comm(1) User Commands comm(1)
NAME
comm - select or reject lines common to two files
SYNOPSIS
comm [-123] file1 file2
DESCRIPTION
The comm utility reads file1 and file2, which must be ordered in the current collating sequence, and produces three text columns as output:
lines only in file1; lines only in file2; and lines in both files.
If the input files were ordered according to the collating sequence of the current locale, the lines written will be in the collating
sequence of the original lines. If not, the results are unspecified.
OPTIONS
The following options are supported:
-1 Suppresses the output column of lines unique to file1.
-2 Suppresses the output column of lines unique to file2.
-3 Suppresses the output column of lines duplicated in file1 and file2.
OPERANDS
The following operands are supported:
file1 A path name of the first file to be compared. If file1 is -, the standard input is used.
file2 A path name of the second file to be compared. If file2 is -, the standard input is used.
USAGE
See largefile(5) for the description of the behavior of comm when encountering files greater than or equal to 2 Gbyte ( 2^31 bytes).
EXAMPLES
Example 1 Printing a list of utilities specified by files
If file1, file2, and file3 each contain a sorted list of utilities, the command
example% comm -23 file1 file2 | comm -23 - file3
prints a list of utilities in file1 not specified by either of the other files. The entry:
example% comm -12 file1 file2 | comm -12 - file3
prints a list of utilities specified by all three files. And the entry:
example% comm -12 file2 file3 | comm -23 -file1
prints a list of utilities specified by both file2 and file3, but not specified in file1.
ENVIRONMENT VARIABLES
See environ(5) for descriptions of the following environment variables that affect the execution of comm: LANG, LC_ALL, LC_COLLATE,
LC_CTYPE, LC_MESSAGES, and NLSPATH.
EXIT STATUS
The following exit values are returned:
0 All input files were successfully output as specified.
>0 An error occurred.
ATTRIBUTES
See attributes(5) for descriptions of the following attributes:
+-----------------------------+-----------------------------+
| ATTRIBUTE TYPE | ATTRIBUTE VALUE |
+-----------------------------+-----------------------------+
|Availability |SUNWesu |
+-----------------------------+-----------------------------+
|CSI |enabled |
+-----------------------------+-----------------------------+
|Interface Stability |Standard |
+-----------------------------+-----------------------------+
SEE ALSO
cmp(1), diff(1), sort(1), uniq(1), attributes(5), environ(5), largefile(5), standards(5)
SunOS 5.11 3 Mar 2004 comm(1)